Gene Information

Name : q1 (Pvag_1625)
Accession : YP_003931262.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : portal vertex protein GpQ
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 1710134 - 1711168 bp
Length : 1035 bp
Strand : -
Note : Bacteriophage capsid portal protein

DNA sequence :
ATGAGCAAACGCAGAGGCCGCAAGGCTCACACCGCCACAACACAGCCGGTACAGGCAACCGCACCGCAGCAGCACGCCGA
GGCGTTTCCCTTTGGCGATCCGACGCCGGTCATGGATAAGCGCGACATTCTGGATTACGCCGAGTGCATCGGTAACGGGC
GCTGGTTTGAGCCGCCGGTCAGCTTTAGCGGGCTGGCTAAGAGCCTGCGCTCGGCCGTGCATCACAGCTCGCCGATTTAT
GTAAAGCGCAACATTCTGGCCTCAACATTCATACCGCACCCGATGATGAGTCAGCAGGAGTTCAGCAAGTTTGCGCTGGA
TTATCTGGTTTTCGGTAACGCCTTTGCCGAGCTGCGCCGCAATGGCCTGGGTAAGCCGCTGCGCCTTGAAACCACGCCGG
CCAAATTCACACGCAGAGGCGTGAAGGATGGCGTTTACTGGTTTGTGAATGACTGGAAGGAGCCGCACGAATTTTCGGCC
GGCAGCGTGTTTCACCTACTGGAGCCGGATATCAATCAGGAGCTTTATGGCCTGCCGGAATATCTGAGCGCGCTTAACTC
TGCCTGGCTGAACGAGGCGGCGACCCTGTTCCGCCGCAAGTATTACCAGAACGGCGCGCATGCCGGTTATATCCTTTACA
TGACCGATGCGGCGCAGAGCAGCAGCGACGTTGACCGGATGCGCCAGGCGATGCGCGACACGAAAGGGCTGGGTAACTTC
CGCAACCTGTTCATGTACGCGCCGAACGGTAAGCCGGACGGGATAAAGATTCTGCCACTCAGTGAAGTGGCGACGAAAGA
TGATTTCTTTAACATCAAGAAGGCCAGCCGTGATGACCTCTTAAGCGCACACCGCGTACCGCCGCAGATGATGGGGATTA
TCCCGGACAACTCCGGCGGATTTGGTGATGCGGTGAAGGCGGCGCAGGTATTTGTCAGAAATGAATTGACGCCCCTGCAG
GAACGGATGAAAGAAATAAACAACTGGTTAAACATGGAAGTTATTGAATTCACAAGTTATAAACTTGATGCATAA

Protein sequence :
MSKRRGRKAHTATTQPVQATAPQQHAEAFPFGDPTPVMDKRDILDYAECIGNGRWFEPPVSFSGLAKSLRSAVHHSSPIY
VKRNILASTFIPHPMMSQQEFSKFALDYLVFGNAFAELRRNGLGKPLRLETTPAKFTRRGVKDGVYWFVNDWKEPHEFSA
GSVFHLLEPDINQELYGLPEYLSALNSAWLNEAATLFRRKYYQNGAHAGYILYMTDAAQSSSDVDRMRQAMRDTKGLGNF
RNLFMYAPNGKPDGIKILPLSEVATKDDFFNIKKASRDDLLSAHRVPPQMMGIIPDNSGGFGDAVKAAQVFVRNELTPLQ
ERMKEINNWLNMEVIEFTSYKLDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 7e-109 66
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 7e-109 66
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 4e-82 55