Gene Information

Name : gtrb1 (Pvag_1453)
Accession : YP_003931092.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : bactoprenol glucosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : 2.4.1.-
Position : 1528786 - 1529736 bp
Length : 951 bp
Strand : +
Note : glycosyltransferases involved in cell wall biogenesis

DNA sequence :
ATGAAAATCTCTTTGGTGGTGCCGGTATTTAATGAAGAGGAGGTTATCCCTCTTTTTTATGATGCGGTCAGAAAATATGA
AGCGCTGGCAGAGTGGCAGGTTGAGATTGTTTTTATCGATGATGGCAGCACAGACGCAACCTATAAACTGATATCCCAGC
TGAGCCAGCGCGATCCGCTGGTGCGCAGTCTGTCGTTTATTCGTAATTTCGGCAAGGAACCGGCGCTGTTTGCCGGCCTG
GAAGCCGCCACAGGCGATGCCGTGATCCCGATTGATGTGGATTTGCAGGATCCGATCACGATTATTCCCGACATGATCCG
TAAATGGCAGGCAGGCGCTGATGTCGTGTTAGCCAGGCGGATTGACAGGCGTGCCGATGGCCACCTCAAACGTAAAACAG
CGCACTGGTTTTATAAACTGCACAACAGCATCAGCGATCCGCAGATAGAGGAGAACGTCGGTGATTTCCGGCTGATGTCG
CGTGAAGTGGTTGAGAACATTAAGCTGCTGCCCGAGAAGAATCTCTTTATGAAGGGCATTCTGAGCTGGGTCGGCGGACA
GACGGACATCGTGGAATATGTGCGCACTGAGCGGATCGCAGGCCGCAGTAAATTCGGCGGCTGGAAGCTATGGAATCTTG
CGCTGGAGGGACTGACCTCATTCTCTACCGTTCCGCTACGCATCTGGTCATATCTGGGCTTTCTGGTGGCCTCGCTGGCC
TTCCTGTATGGACTCTGGATGATCGTGGATAAACTGCTGTTTGGTAATCCGGTGCCGGGTTACCCCTCTATTCTGGTTTC
GGTGCTGTTTCTCGGTGGGGTGCAGCTTATTGGCATTGGCGTGTTGGGTGAATATATTGGCCGCATCTATATAGAAACCA
AAAACCGGCCTCGCTATATTTTGCGAAAATCCGTGACGACCAGACTAAACCCGCCTCAGAACACGGATTAA

Protein sequence :
MKISLVVPVFNEEEVIPLFYDAVRKYEALAEWQVEIVFIDDGSTDATYKLISQLSQRDPLVRSLSFIRNFGKEPALFAGL
EAATGDAVIPIDVDLQDPITIIPDMIRKWQAGADVVLARRIDRRADGHLKRKTAHWFYKLHNSISDPQIEENVGDFRLMS
REVVENIKLLPEKNLFMKGILSWVGGQTDIVEYVRTERIAGRSKFGGWKLWNLALEGLTSFSTVPLRIWSYLGFLVASLA
FLYGLWMIVDKLLFGNPVPGYPSILVSVLFLGGVQLIGIGVLGEYIGRIYIETKNRPRYILRKSVTTRLNPPQNTD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 8e-106 77
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-104 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gtrb1 YP_003931092.1 bactoprenol glucosyl transferase VFG0670 Protein 4e-106 78