Gene Information

Name : tpx (Pvag_1450)
Accession : YP_003931089.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.-
Position : 1526082 - 1526585 bp
Length : 504 bp
Strand : +
Note : Peroxiredoxin

DNA sequence : 
ATGTCTCAGACTGTTCATTTTCAGGGTAACGCCGTACCGGTTGCTGGTCAGTTTCCTCAGGCTGGCGATAAAGCCAAAGC
TTTCACGCTGGTCGCTAAAAACCTGGTCAACGTTGCGCTCTCTGAGTATGCAGGAAAACGCAAAATTCTGAACATTTTCC
CGAGTGTTGATACCGGCGTCTGTGCTTCATCAGTGCGCAAATTCAATCAGGCCGCGAGCGAACTGAATAATACGGTGGTG
CTGTGTATTTCTGCGGATTTGCCGTTTGCCCAGTCACGTTTCTGTGGCGCAGAAAACCTGAGCAACGTAGTCACCCTGTC
GACGCTGCGCGGCTCAGAGTTTAAATATGATTATGGCGTGGAAATTGCCGATGGTGCGCTGGAAGGTCTGACTGCTCGTG
CGGTGATCGTGCTGGATGAGAACGATAAAGTGATCTACAGCCAGCTGGTGGATGAAATCACCACTGAGCCTGACTACGAC
GCTGCACTGGCCGCGCTGAAGTAA

Protein sequence : 
MSQTVHFQGNAVPVAGQFPQAGDKAKAFTLVAKNLVNVALSEYAGKRKILNIFPSVDTGVCASSVRKFNQAASELNNTVV
LCISADLPFAQSRFCGAENLSNVVTLSTLRGSEFKYDYGVEIADGALEGLTARAVIVLDENDKVIYSQLVDEITTEPDYD
AALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 5e-35 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-35 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-34 47
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 7e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tpx YP_003931089.1 thiol peroxidase VFG0087 Protein 1e-35 48