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Name : hifD (Pvag_1342) Accession : YP_003930981.1 Strain : Pantoea vagans C9-1 Genome accession: NC_014562 Putative virulence/resistance : Unknown Product : Minor fimbrial subunit hifD Function : - COG functional category : N : Cell motility COG ID : COG3539 EC number : - Position : 1410890 - 1411435 bp Length : 546 bp Strand : + Note : P pilus assembly protein, pilin FimA DNA sequence : ATGAAGATGAAAATCAGATCGCGCAGTCTTGCTGTTTTGGTCAGTTCTGCACTGGTGTCGGGAAGCGTATTCGCTGTCTC AGATAACACCATCAATTTTCAGGGCGAAGTCACCGCTGAAACCTGTTCAGTGTCGGTAAACGGTAATAATGCATCCCCTG TCGTTCTGCTACCAACGGTGAGCACGTCGGACCTTGCAACGTCTGGCACGACTGCGGGTGATACCACCTTCACCGTGGGC GTGAGCGGCTGTACCGGTGACAGCACTAAGACGACGAAAATCTCGACGGTATTTGTCGGCAATAATGTCAGTTCTGCCGG TAACTTAACCAATACCGGCACAGCAAAAAATGTTGAAGTACAAATCCTCGATCCAAAGGATGCGGTTATCAATCTGACCA GTGGTTACGCCGGCAGCGGCGATATGACGCTACAGGCGGGTGAAACTTCAGGCTCAGCCACCTACTCTGCCCGCTACTAC GCCGCAGGCACACCTACTGCAGGGACGGTAACCGCATCACTGCAATATGCCGTGACTTACCAGTAA Protein sequence : MKMKIRSRSLAVLVSSALVSGSVFAVSDNTINFQGEVTAETCSVSVNGNNASPVVLLPTVSTSDLATSGTTAGDTTFTVG VSGCTGDSTKTTKISTVFVGNNVSSAGNLTNTGTAKNVEVQILDPKDAVINLTSGYAGSGDMTLQAGETSGSATYSARYY AAGTPTAGTVTASLQYAVTYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cupD1 | AAP84171.1 | putative fimbrial protein precursor | Not tested | PAPI-1 | Protein | 2e-11 | 41 |
