Gene Information

Name : yycE (Pvag_1330)
Accession : YP_003930969.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1400362 - 1400760 bp
Length : 399 bp
Strand : +
Note : Lactoylglutathione lyase and related lyases

DNA sequence :

ATGACTACTCAGCATTTGCGTATTGCCCGACCTGTGACTGATCTGAAACAAAGCAGTCAGATCTATTGCCGCGGGCTGGG
GTTGCAGGAAATCGGTGAGTTTACCGATCATCAGGGTTTTAGTGGTGTGATGCTGGGCGCGGAGGGATTGGGCTGGCATC
TCGAATTCACACTCTGTCATACCCATCCCGTCCGGCCAGCGCCAACGGAAGACGATCTGCTGGTGCTTTACATTCCCCAC
CAGCCAGACTGGCTGTTTCGTTGTACTTCTATGGATGACGCAGGCTTCCAGCGGGTGCCATCCTTCAATCCTTACTGGGA
TCAGCAGGGCGTGACATTTATCGACAAGGATGGTTATCGTGTCGTTATCCAGCATGGCTTGTGGCAACCCACACGCTGA

Protein sequence :

MTTQHLRIARPVTDLKQSSQIYCRGLGLQEIGEFTDHQGFSGVMLGAEGLGWHLEFTLCHTHPVRPAPTEDDLLVLYIPH
QPDWLFRCTSMDDAGFQRVPSFNPYWDQQGVTFIDKDGYRVVIQHGLWQPTR

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
orf38	AAO18063.1	Orf38	Not tested	TTSS locus	Protein	7e-28	49

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
yycE	YP_003930969.1	hypothetical protein	CP000647.1.gene1649.	Protein	2e-39	59