Gene Information

Name : umuD (Pvag_1213)
Accession : YP_003930852.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Unknown
Product : UmuD protein
Function : -
COG functional category : K : Transcription
COG ID : COG1974
EC number : 3.4.21.-
Position : 1281430 - 1281849 bp
Length : 420 bp
Strand : +
Note : SOS-response transcriptional repressors (RecA- mediated autopeptidases)

DNA sequence :
GTGGAATTCATTAAACCTGCGGACATTCGCGCCGTTATGCCTTTACCGCTTTATATCGAACGTGTGCCGTGTGGATTTCC
CTCCCCGGCGCAGGATTATGTCGAACAACGTATCGATCTCAATGCGCTGATGGTGCAGCATCCCAGCGCCACCTATTTTG
TCCGCGTCAGCGGCGAGTCGATGATTGAGGCGGGCATTAACGATGGTGACATGCTGGTGGTCGACAGCTCGCTCACCGCC
TCACATGGCGATATCGTGGTGGCCGCCGTCGACGGTGAATTTACCGTTAAACGTCTTCAGCTTCATCCCTGCCTGCAACT
GATGCCGATGAATACCAAATTTAAACCGATCGCTATCCAGACCGAAGATGCGCTGGAGGTGTTTGGTGTTGTGACCTTTG
TTATTAAATCGACACACTGA

Protein sequence :
MEFIKPADIRAVMPLPLYIERVPCGFPSPAQDYVEQRIDLNALMVQHPSATYFVRVSGESMIEAGINDGDMLVVDSSLTA
SHGDIVVAAVDGEFTVKRLQLHPCLQLMPMNTKFKPIAIQTEDALEVFGVVTFVIKSTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 2e-24 50
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 1e-21 47