Gene Information

Name : pykF (Pvag_1162)
Accession : YP_003930804.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : Pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 1233239 - 1234651 bp
Length : 1413 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAGACTAAAATCGTTTGTACAATCGGCCCGAAAACCGAATCCGAAGAGATGCTGACTCAACTGCTTGAAGCGGG
CATGAATGTTATGCGTCTTAACTTCTCTCACGGCGACTACGCCGAGCATGGTCAACGCATTACTAATATGCGTGCTGTCA
TGCAAAAAACCGGTCGTCAGGCGGCTATCCTGCTGGACACCAAAGGCCCTGAAATCCGCACCATGAAGCTGGAAGGCGGC
AACGATGCGGCGCTGAAAGCAGGCCAGACCTTTACCTTCACCACCGACCAGAGTGTGATCGGCAACAGCGAGCGCGTTGC
GGTGACCTACCCGGGTTTCACAGCCGACCTGAAAATTGGTAACACCGTGCTGGTCGATGATGGCCTGATTGGCATGGAAG
TGACCGAAGTCACCGAAAATACCGTCGTGTGTAAAGTCCTGAACAATGGCGATCTGGGTGAGAACAAAGGCGTTAACCTG
CCAGGCGTCTCCATCCAGCTGCCTGCACTGGCTGAAAAAGACAAGCGCGACCTGATTTTTGGTTGTGAGCAGGGCGTAGA
CTTTGTTGCCGCCTCGTTCATCCGCAAGCGTTCAGACGTGCTGGAAATTCGTGAGCACCTGAAACAGCACGGCGGCGAGC
ATATCCAGATCATCTCTAAAATCGAAAACCAGGAAGGCCTGAATAACTTCGACGAAATCCTCGAAGCGTCTGACGGCATC
ATGGTTGCGCGTGGTGACCTGGGTGTTGAGATCCCGGTTGAAGAAGTGATCTTCGCGCAGAAGATGATGATCAAAAAATG
TAATAAAGCACGCAAAGTGGTAATCACCGCGACGCAGATGCTTGATTCAATGATCAAGAACCCGCGCCCTACCCGCGCAG
AAGCCGGTGATGTGGCGAACGCCATCCTCGACGGTACCGATGCAGTCATGCTGTCTGGTGAGAGCGCTAAGGGTCGTTAT
CCGCTGGAGTCGGTCACCATCATGGCGACCATCTGTGAGCGTACCGACCGCGTCATGAAGTCACGCATTGACAGCCAGAG
CGACACCCGCAAACTGCGTATCACTGAAGCAGTCTGCCGTGGTGCGGTAGAGACAGCTGAGAAGCTGGAAGCACCACTGA
TTGTGGTCGCGACCGAAGGCGGTAAGTCTGCTAAAGCCGTACGTAAATATTTCCCGAACGCCACCATTCTGGCACTGACG
ACCAATCAGACCACCGCACGTCAGCTGATCCTGAGCAAAGGGATTGAGACGCGTCTGGTCACTGAAATCGCCTCAACCGA
TGATTTCTATCGTCTGGGTAAAGAAGCGGCGCTGGAAAGTGGTTATGGTCAGAAAGGTGATGTTGTGGTGCTGGTATCAG
GTGCATTAGTACCAAGCGGAACTACCAACACCGCCTCTGTACACGTACTGTAA

Protein sequence :
MKKTKIVCTIGPKTESEEMLTQLLEAGMNVMRLNFSHGDYAEHGQRITNMRAVMQKTGRQAAILLDTKGPEIRTMKLEGG
NDAALKAGQTFTFTTDQSVIGNSERVAVTYPGFTADLKIGNTVLVDDGLIGMEVTEVTENTVVCKVLNNGDLGENKGVNL
PGVSIQLPALAEKDKRDLIFGCEQGVDFVAASFIRKRSDVLEIREHLKQHGGEHIQIISKIENQEGLNNFDEILEASDGI
MVARGDLGVEIPVEEVIFAQKMMIKKCNKARKVVITATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGRY
PLESVTIMATICERTDRVMKSRIDSQSDTRKLRITEAVCRGAVETAEKLEAPLIVVATEGGKSAKAVRKYFPNATILALT
TNQTTARQLILSKGIETRLVTEIASTDDFYRLGKEAALESGYGQKGDVVVLVSGALVPSGTTNTASVHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 0.0 87
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 0.0 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykF YP_003930804.1 Pyruvate kinase VFG0479 Protein 0.0 87