Gene Information

Name : Pvag_1028 (Pvag_1028)
Accession : YP_003930670.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : type VI secretion system, core protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 1081946 - 1082479 bp
Length : 534 bp
Strand : +
Note : -

DNA sequence :

ATGGCAACAAGCAAATCCAGTGGGCAGAAGTTCATTGCCCGCAATCGCGCGCCTCGCGTTCAGATTGAATATGACGTGGA
AATTTATGGCGCGGAACGCAAAATCCAGCTGCCGTTTGTGATGGGCGTGCTGGCGGATCTGGTGGGTAAACCGCTGGAGC
CGCAGCCGGGCATCGACGACCGCAAATTCCTTGAGATCGACATCGACAACTTCGATGAGCGCATGAAAGCGCTGAAGCCA
CGCGCCGCGTTCCAGGTAGACAACACCCTGAACGGCGAAGGCAAGCTCAACATCGATCTCACTTTCGACAGCATGGACGA
CTTTTCGCCGGATGCCGTGGCCCGCAACGTCGAGCCGCTGAGCAAGCTGCTGGAAGCGCGTACCCAGCTGGCAAATCTGC
TGACCTATATGGACGGCAAAAACGGTGCGGAAGAGCTGATTGGTAAAGTGCTGCAGGACCCAACGCTGCTGCAGGCTCTG
ACCCATCTGCCTAAGCAGGATGAGGCCACTGAAGGTAAGGAGCCGCAGGCATGA

Protein sequence :

MATSKSSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVLADLVGKPLEPQPGIDDRKFLEIDIDNFDERMKALKP
RAAFQVDNTLNGEGKLNIDLTFDSMDDFSPDAVARNVEPLSKLLEARTQLANLLTYMDGKNGAEELIGKVLQDPTLLQAL
THLPKQDEATEGKEPQA

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
STY0297	NP_454879.1	conserved hypothetical protein	Not tested	SPI-6	Protein	1e-56	68

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
Pvag_1028	YP_003930670.1	type VI secretion system, core protein	VFG2069	Protein	5e-60	73