Gene Information

Name : aldB (Pvag_1020)
Accession : YP_003930662.1
Strain : Pantoea vagans C9-1
Genome accession: NC_014562
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : 1.2.1.3
Position : 1070163 - 1071683 bp
Length : 1521 bp
Strand : +
Note : NAD-dependent aldehyde dehydrogenases

DNA sequence : 
ATGCGTTACGCTGCCCCCGGAGAACAGGGTTCTCTGATTACGCTACAGAAGAAGTATGGCAACTTCATTAATGGTGAATT
CGTCGCGCCGGTGAAGGGTAACTACTTTACTAACACCTCGCCGGTAAACGGCTCTGCGGCCGGTGAGTTCCCGCGCTCAG
ACGCGGCCGATGTGGATAACGCGGTGGCCGCCGCGGCAGCGGCTGCGGACGCCTGGGGCAAGACCTCACCGCAACAACGC
GCGCTGCTGCTACTGAAAATTGCCGATCGGCTGGAACAGCATCTGGAGACCATGGCGGTCTATGAAACCTGGGATAACGG
TAAACCAGTGCGCGAAACGCTAGCGGCCGATATGCCGCTGGCGGTCGATCACTTCCGCTACTTTGCCGGTTGTGTCCGGG
CGCAGGAGGGCAGCGCGGCAGAGATTGATGAGTTCACTGCTGCCTACCATTTCCACGAGCCGCTGGGCGTGGTGGCGCAG
ATTATCCCATGGAACTTCCCGCTGTTGATGGCGGCCTGGAAACTGGCTCCGGCGCTGGGCGCAGGGAACTGCGTGGTGCT
GAAACCGGCTGAACAGACGCCGCTGTCGATCACCATCTTTGTCGATCTGATTAAAGATCTGCTGCCGCCGGGCGTGCTGA
ATGTGGTGCACGGCTTTGGTAAAGAGGCGGGTGAGGCGCTGGCGTCCCACTCCGGTATCGCCAAGGTCGCCTTTACCGGC
TCTACTGCCACCGGCGGGCACATTCTGGAGCTGGCCGCCAAAAGTCTGATCCCCTCAACGGTCGAACTGGGTGGCAAGTC
ACCGAACATCTTCTTTGAAGACATCATGCAGGCGGAAGAGAGCTTTATTGAGAAAGCGGCCGAAGGCGTGGTGCTGGGCT
TCCTGAATCAGGGTGAAGTCTGCACCTGTCCATCGCGTGCGCTGGTGCAGGAGTCGATCTACGAGCCGTTTATGGCGGCG
GTGATGAAGCGGGTGAAAACCATCAAACGCGGTGACCCGCTGGATACCGATACCATGGTAGGCGCGCAGGCGTCGCAGCA
GCAGTTCGACAAAATCCTCTCTTATCTTGAGGTGGCACGGCAGGAGGGCGCAGAAGTGCTGGTAGGCGGTGGCGTAGAGA
AGCTGGATGACTCACTCAACAGCGGTTACTACATCCAGCCAACCCTGCTGAAAGGTAACAACAGCATGCGGGTGTTCCAG
GAGGAGATCTTTGGCCCGGTGATCGGCATTACCACCTTTAAAGATGAGGCGGAAGCGATTAGCATCGCCAACGACTCGAT
TTATGGCCTGGGTGCCGGCGTCTGGACCCGCGATATCAACCGTGCCTATCGGGTGGGCAGGGCGATCAAAGCGGGGCGCG
TCTGGACAAACTGTTATCACCTCTATCCGGCGCACGCTGCTTTTGGCGGCTACAAGAAGTCGGGCATCGGGCGTGAAACT
CACAAAATGATGCTCGATCACTATCAGCAGACGAAAAACCTGCTGGTCAGCTACAGTATTGAGCCGCTGGGCTTCTTCTG
A

Protein sequence : 
MRYAAPGEQGSLITLQKKYGNFINGEFVAPVKGNYFTNTSPVNGSAAGEFPRSDAADVDNAVAAAAAAADAWGKTSPQQR
ALLLLKIADRLEQHLETMAVYETWDNGKPVRETLAADMPLAVDHFRYFAGCVRAQEGSAAEIDEFTAAYHFHEPLGVVAQ
IIPWNFPLLMAAWKLAPALGAGNCVVLKPAEQTPLSITIFVDLIKDLLPPGVLNVVHGFGKEAGEALASHSGIAKVAFTG
STATGGHILELAAKSLIPSTVELGGKSPNIFFEDIMQAEESFIEKAAEGVVLGFLNQGEVCTCPSRALVQESIYEPFMAA
VMKRVKTIKRGDPLDTDTMVGAQASQQQFDKILSYLEVARQEGAEVLVGGGVEKLDDSLNSGYYIQPTLLKGNNSMRVFQ
EEIFGPVIGITTFKDEAEAISIANDSIYGLGAGVWTRDINRAYRVGRAIKAGRVWTNCYHLYPAHAAFGGYKKSGIGRET
HKMMLDHYQQTKNLLVSYSIEPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-146 63
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-151 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-150 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldB YP_003930662.1 aldehyde dehydrogenase VFG0082 Protein 2e-146 63