Gene Information

Name : ecpD (Pvag_pPag10090)
Accession : YP_003929600.1
Strain :
Genome accession: NC_014561
Putative virulence/resistance : Virulence
Product : chaperone protein fimb/fhad precursor
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 93853 - 94590 bp
Length : 738 bp
Strand : +
Note : P pilus assembly protein, chaperone PapD

DNA sequence : 
ATGAAAAAAAAAAGTTTTAAATTTCTAATCTCCTGCTTGCTCACTTGCGCAATGACTTCGTCTGCCTTTGCCAGTGTGAC
TATTATTGGTACCCGGGTAATCTACCCTGCCTCCGAAAAAGAGGTTACCGTTCGTCTGGATAACCGCGGCGATCATCCCG
CGCTTGTTCAGGCATGGGTTGATAACGGAAACCCTGACGAAGCAGTAGATAAAATAAATGTTCCTTTCGTTTTATTACCT
CCAGTTTTTCGTATGGAGGCGAATAAAGGGCAAACGTTACGTATTGTTTTTACGGGCGCCAGTCTGCCCACCGATAAAGA
ATCTATTTTCTGGCTTAATGTTCTTGATATACCTCCTCGTGATAAAAGTCTGGCTAACCAGAACCAGCTACAAATGGCAA
TCCGGAGTCGCATCAAGATTTTTTATCGTCCGGTTCAGTTTGATACAGCTCAGGCCAATAAAGCTGCATCAGGACTGGTA
TGGCGTCACGGTCAAAAACCTAATTTTCTTTCCGCAACCAACAACTCACCTTTCTACGTTAACGTCTCACAGATTAATGC
AGAAGATAACGCAGGTCATAAATTGGTTAGTGAAAAAGGGGAAATGCTGGCACCAGGCGAAACAAAAGAATTCCCTCTGA
AAGGCATGAGCACAAGCCAAATAAAAACAACATTTAATTATCAGTATCTGGACGACTTTGGTGCAGCACGTAAGGTTGAA
AGCAAAATAAACGATTAG

Protein sequence : 
MKKKSFKFLISCLLTCAMTSSAFASVTIIGTRVIYPASEKEVTVRLDNRGDHPALVQAWVDNGNPDEAVDKINVPFVLLP
PVFRMEANKGQTLRIVFTGASLPTDKESIFWLNVLDIPPRDKSLANQNQLQMAIRSRIKIFYRPVQFDTAQANKAASGLV
WRHGQKPNFLSATNNSPFYVNVSQINAEDNAGHKLVSEKGEMLAPGETKEFPLKGMSTSQIKTTFNYQYLDDFGAARKVE
SKIND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33727.1 putative F17-like fimbrial chaperone Virulence PAI I 536 Protein 7e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ecpD YP_003929600.1 chaperone protein fimb/fhad precursor VFG1468 Protein 4e-40 42
ecpD YP_003929600.1 chaperone protein fimb/fhad precursor VFG0007 Protein 5e-39 41
ecpD YP_003929600.1 chaperone protein fimb/fhad precursor VFG1145 Protein 1e-31 41