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Name : HPSJM_04165 (HPSJM_04165) Accession : YP_003928740.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 845822 - 847087 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATATAGGGCTTGTGGGTTTAGGGTGCGTGGGGAGTGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGGGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAGCACAAAGGCT ATGCTTTTGAAATCAGCGATGATTTAGAAAGCTTGATAGAAGATAAAGAAATTGATATTATCGTGGAGCTTATGGGTGGG GTGGAAGCGCCCTATCTTTTAGCTAAAAAAACTTTAGCCAAGCAAAAAGCCTTCGTTACGGCCAATAAAGCCATGTTAGC GTATCACCGCTATGAATTAGAACAAACCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGTGGGGGTATCCCCA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCCAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACGAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCGAGCTTTAAGGACGCTTTGAAAGACGCCCAACATTTAGGCTATGCGGAATT GAACCCTGAATTTGACATTAAGGGCATTGATGCGGCGCACAAATTGTTGATTTTAGCGTCTTTAGCGTATGGTATTGATG CGAAATTAGAAGAAATCTTGATTGAAGGCATTGAAAAAATAGAGCCAGACGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACATCCGGATTGTATTGAATTAAGGGTGCATCCAAGCATGATCAAAAACGA ATGCATGCTTTCTAAAGTGGATGGGGTGATGAACGCTATCAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGAGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGAAAAAAAAGCTCTCTA ATGTTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTACTATGCGCGCTTGTT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTCTTAC AAAAAGAAATCCCGCAATCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGCTGAACGCC CTTAAAGAGCTTGAAAATTTACAAAGCGTGTTGGATACCCCTAAAATGATTCGTTTGGAAAATTGA Protein sequence : MKKRLNIGLVGLGCVGSAVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYAFEISDDLESLIEDKEIDIIVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQTAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHPDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPQSNKAKILFSTHTTNEKSMLNA LKELENLQSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 7e-68 | 41 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 7e-68 | 41 |
