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Name : HPSJM_03845 (HPSJM_03845) Accession : YP_003928676.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : permease/na-h antiporter Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 780662 - 781975 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTGTATGGAGCAATCCCGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGACT CAATGTCATGCTTTCTATGATTAGCGCGACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACGGAGAGTTTTAATG TAATGATAGACGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAGTAAATTAATAGGCTTGATGAATTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGCTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGTGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCCAATGGCGTTAGCACCACCATAGC GCAAATCACAGGAGTGATGTGGATAGCAGGGTTAGCGATGGTTGTTGGGCTACTTGCCGCCGTATTAACGCTATACAAAA AACCCAGGCGCTACCAAGAAAAATCTTTTAATATAGAAGATTACGCCTCGCTTAAATTAAACTACCATGACTATTTGACT TTTATAGGGATTGTCGTGGCGTTTGTGATCCAATTAGCCACCGATTCTATGCCTTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGTGGTATTAAGTTTAAAGAAACAGACTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGCTAGTGGCTAGTGGGTTTGGGGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGCTTAGTGAATGCGATC ACAAGCGTGATCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTGTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATCCCTATCATTGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCACGGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCCTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAACCTCCCTTTGATTGT TTTTGGAGTTCTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSVWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNVMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALSKLIGLMNYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSTTIAQITGVMWIAGLAMVVGLLAAVLTLYKKPRRYQEKSFNIEDYASLKLNYHDYLT FIGIVVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSVIQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSTESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVLGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-52 | 42 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-52 | 42 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-52 | 42 |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-52 | 42 |
