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Name : HPSJM_02710 (HPSJM_02710) Accession : YP_003928455.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : ATP-dependent protease peptidase subunit Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG5405 EC number : 3.4.25.1 Position : 541728 - 542270 bp Length : 543 bp Strand : + Note : COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit DNA sequence : ATGTTTGAAGCGACGACGATTTTGGGCTATAGAGGGGAATTTGACAATAAGAAATTTGCGCTCATTGGAGGCGATGGGCA GGTAACTTTGGGTAATTGCGTAGTCAAAGCCAATGCGACAAAAATCAGGAGCTTGTATCACAACCAGGTTTTAAGCGGGT TTGCTGGGAGCACGGCGGACGCTTTTAGTTTGTTTGATATGTTTGAACGCATTTTAGAGAGCAAAAAGGGGGATTTGTTT AAAAGCGTGGTGGATTTCAGCAAAGAATGGCGCAAAGATAAGTATTTACGCCGATTAGAAGCGATGATGATCGTTTTAAA CTTCGATCACATTTTTATTTTGAGCGGCACGGGCGATGTTTTAGAAGCTGAAGACAATAAGATCGCTGCTATTGGGAGTG GGGGGAATTACGCCTTAAGCGCGGCTAGGGCTTTGGATCATTTCGCTCATTTAGAGCCTAGAAAACTCGTAGAAGAGTCC TTAAAAATCGCAGGGGATCTTTGCATTTACACCAACACGAATATTAAAATTTTGGAGCTTTAA Protein sequence : MFEATTILGYRGEFDNKKFALIGGDGQVTLGNCVVKANATKIRSLYHNQVLSGFAGSTADAFSLFDMFERILESKKGDLF KSVVDFSKEWRKDKYLRRLEAMMIVLNFDHIFILSGTGDVLEAEDNKIAAIGSGGNYALSAARALDHFAHLEPRKLVEES LKIAGDLCIYTNTNIKILEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslV | YP_003728752.1 | protein HslV | Not tested | cag PAI | Protein | 4e-77 | 98 |
