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Name : HPSJM_02690 (HPSJM_02690) Accession : YP_003928451.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG0790 EC number : - Position : 537827 - 538681 bp Length : 855 bp Strand : + Note : COG0790 FOG: TPR repeat, SEL1 subfamily DNA sequence : ATGTTTAAAGATTTTTATCGCACCACCCTCTCTTTTTTAAAGTCTTTATTGCTTTTACTAGTTTTATTGTTGCCGTTTTC GCTTTGTATAGCTGATGAATATATTAGCATCAGTGATGATTGGGATGAAAGGGCGCGAAATCAGTGGGATGAAATTGCGC GAAATCATAAGACATATTATTTTGAAAATGGTTTAGACCATTTTAATCAAGGCCAATACAAACAAGCCTTTAAAGATTTT AAATTGGCGCAAGAATACAGCATTGGGCTTGGCAGCGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGT GGATTACAAAAAAGCGCAATTCTATGCAGAAAACGCTATCAAAGGGTATGGGAGCGGGTTGTTAGGGGGCGCTTTAATTT TAGGACGCATGCAAGCGCAAGGCTTAGGGATGAAAAAGGATTTGAAACAAGCGCTTAAGACTTACAGGCATGTGGTTCGC ATGTTTTCTAATAAAAGCACAAATTATTTTGCTAACAATTTTAGATTACCAAACCTTGCGTTCACTAGTATGCTTATTGG ATCGCGATTCATTGATCTTTCAGGTTTGAGCGCGAATCCTATAAAATTTGGAAAGAAGTTTGGAATACTTGTTAAGAAAT CCACTCAAATCAAAGATAAGACACTTCTTTGGGAAGACATTGCTGAAATTTCAAGCAATATTACTTTACTCAAACAACAA ATGGGGGAGATCCTTTATAGGATTGGGATCGCTTATAAAGAAGGGCTTGGCACTAGAAAGAAAAAGAACAGGGCTAAAAA ATTCCTGCAAAAATCCGCAGAATTTGGCTATGAAAAAGCCATGGAAGCTCTGTAG Protein sequence : MFKDFYRTTLSFLKSLLLLLVLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQAFKDF KLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAIKGYGSGLLGGALILGRMQAQGLGMKKDLKQALKTYRHVVR MFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEISSNITLLKQQ MGEILYRIGIAYKEGLGTRKKKNRAKKFLQKSAEFGYEKAMEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_726 | YP_003728747.1 | chitin synthase regulatory factor 3 | Not tested | cag PAI | Protein | 7e-106 | 95 |
