|
Name : HPSJM_02655 (HPSJM_02655) Accession : YP_003928444.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Virulence Product : cag pathogenicity island protein (cag6) Function : - COG functional category : - COG ID : - EC number : - Position : 530916 - 531515 bp Length : 600 bp Strand : + Note : - DNA sequence : ATGGAACTCGGTTTCAATGAAGCAGAAAGACAAAAGATCTTAGATAGCAATAGTTCTCTTATGAGAAATGCGAATGAAGT AAGGGATAAGTTTATTCAAAATTACGCCTCTTCTTTAAAAGATAGCAACGATCCGCAAGATTTTTTGAGAAGGGTTCAAG AATTAAGAATCAATATGCAAAAGAATTTTATTAGTTTTGATGCTTATTACAACTATTTAAACAACCTTGTGTTAGCCAGT TACAATCGTTGCAAACAAGAAAAGACTTTTGCAGAAAGCACGATCAAAAATGAACTAACGCTTGGAGAGTTTGTTGCAGA AATTTCTGACAACTTCAATAATTTCATGTGTGATGAAGTGGCAAGAATTTCAGACCTAGTGGCTTCTTATCTGCCAAGAG AGTATTTACCGCCATTCATAGATGGCAATATGATGGGCGTGGCGTTTCAGATTCTAGGGATAGATGATTTTGGGAGGAAG CTCAATGAGATTGTCCAAGATATAGGGACTAAATATATTATTTTGAGCAAAAATAAGACTTATCTCACTTCTTTAGAAAG GGCTAAATTGATAACCCAATTAAAATTAAATTTGGAATAA Protein sequence : MELGFNEAERQKILDSNSSLMRNANEVRDKFIQNYASSLKDSNDPQDFLRRVQELRINMQKNFISFDAYYNYLNNLVLAS YNRCKQEKTFAESTIKNELTLGEFVAEISDNFNNFMCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGIDDFGRK LNEIVQDIGTKYIILSKNKTYLTSLERAKLITQLKLNLE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HP0526 | BAD13969.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-86 | 99 |
| cagZ | YP_003728738.1 | cag pathogenicity island protein Z | Virulence | cag PAI | Protein | 5e-86 | 99 |
| cag-Z | AAF80197.1 | Cag-Z | Virulence | cag PAI | Protein | 8e-87 | 99 |
| cagZ | YP_005779064.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-86 | 99 |
| HP0526 | NP_207322.1 | cag pathogenicity island protein (cag6) | Virulence | cag PAI | Protein | 2e-86 | 99 |
| HP0526 | BAD13887.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-87 | 99 |
| HP0526 | BAD13859.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-86 | 99 |
| orf12 | NP_223193.1 | cag island protein | Virulence | cag PAI | Protein | 1e-86 | 99 |
| HP0526 | BAD13997.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-86 | 99 |
| cag6 | AAR03860.1 | Cag6 | Virulence | cag PAI | Protein | 3e-86 | 99 |
| HP0526 | BAD13942.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-86 | 99 |
| HP0526 | BAD13778.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-86 | 99 |
| cagZ | YP_005775729.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-86 | 99 |
| HP0526 | BAD14025.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-86 | 98 |
| cag6 | AAR03918.1 | Cag6 | Virulence | cag PAI | Protein | 4e-86 | 98 |
| HP0526 | BAD13914.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-87 | 98 |
| cag6 | AAR03949.1 | Cag6 | Virulence | cag PAI | Protein | 4e-86 | 98 |
| cag6 | AAR03889.1 | Cag6 | Virulence | cag PAI | Protein | 2e-85 | 98 |
| HP0526 | BAD13805.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-86 | 98 |
| HP0526 | BAD14051.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 9e-86 | 98 |
| cagZ | YP_005777270.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-85 | 98 |
| cagZ | YP_005774543.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-85 | 97 |
| HP0526 | BAD13832.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-86 | 97 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSJM_02655 | YP_003928444.1 | cag pathogenicity island protein (cag6) | VFG0286 | Protein | 6e-87 | 99 |
