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Name : HPSJM_02610 (HPSJM_02610) Accession : YP_003928435.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Virulence Product : cag island protein Function : - COG functional category : - COG ID : - EC number : - Position : 515430 - 516560 bp Length : 1131 bp Strand : - Note : - DNA sequence : ATGCTTGCAAAAATCGTTTTTAGCTCGTTGGTTGCGTTTGGAGTTTTGTCGGCTAATGTGGAGCAGTTTGGTTCATTTTT CAACGAGATAAAAAAAGAACAAGAAGAAGTGGCTGCAAAAGAAGACGCTCTTAAGGCTCGTAAGAAGCTCTTAAACAATA CGCATGATTTCTTAGAAGACTTGGTTTTTAGAAAACAAAAAATCAAAGAGCTTGTGGATTACAGAGCTAAAGTTCTTTTA GATTTAGAAAACAAATACAAAAAAGAAAAAGAGGCTCTAGAGAAAGAGACAAGAGGTAAAATCCTTACTGCTAAGTCAAA GGCTTATGGGGATCTAGAGCAAGCCTTAAAAGATAACCCTCTCTATAAGAAACTTCTTCCTAACCCTTATGCCTATGTTT TAAACCAAGAAACATTCACGCAAGAGGATAAGGAGCGTTTGAGTTATTACTACCCCCAAGTGAAAACGAGCAGTATTTTT AAAAAAACTACCGCTACCACTAAAGATAAGGCTCAGGCTTTGCTTCAAATGGGTGTGTTTTCTTTAGATGAAGAACAAAA CAAAAAAGCGAGCCGATTAGCTTTATCTTACAAGCAAGCGATTGAAGAATATTCCAATAACATTTCTAATTTATTGAGCA GAAAAGAATTGGATAATATAGATTATTACTTGCAGCTTGAAAGAAACAAATTTGACTCCAAAGCAAAAGATATTGCCCAA AAAGCTACTAACACGCTTATTTTTAACTCGGAACGCTTGGCGTTTAGCATGGCGATTGATAAGATCAATGAGAAATACTT AAGGGGCTATGAGGCTTTTTCTAACTTGTTGAAAAATGTCAAAGATGATGTGGAATTGAATACTTTGACTAAAAACTTCA CCAACCAAAAATTGAGTTTCGCTCAAAAACAAAAATTGTGTTTGTTGGTTTTAGACAGCTTCAATTTTGATACCCAATCC AAAAAATCTATATTAAAAAAGACTAATGAATACAATATCTTCGTAGATAGCGATCCTATGATGAGCGACAAAACAACTAT GCAAAAAGAACACTACAAGATATTTAATTTCTTTAAAACAGTGGTTTCTGCATACCGGAACAATGTTGCCAAGAATAACC CCTTTGAATAG Protein sequence : MLAKIVFSSLVAFGVLSANVEQFGSFFNEIKKEQEEVAAKEDALKARKKLLNNTHDFLEDLVFRKQKIKELVDYRAKVLL DLENKYKKEKEALEKETRGKILTAKSKAYGDLEQALKDNPLYKKLLPNPYAYVLNQETFTQEDKERLSYYYPQVKTSSIF KKTTATTKDKAQALLQMGVFSLDEEQNKKASRLALSYKQAIEEYSNNISNLLSRKELDNIDYYLQLERNKFDSKAKDIAQ KATNTLIFNSERLAFSMAIDKINEKYLRGYEAFSNLLKNVKDDVELNTLTKNFTNQKLSFAQKQKLCLLVLDSFNFDTQS KKSILKKTNEYNIFVDSDPMMSDKTTMQKEHYKIFNFFKTVVSAYRNNVAKNNPFE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cagM | NP_223203.1 | cag island protein | Virulence | cag PAI | Protein | 7e-152 | 100 |
| HP0537 | BAD13953.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-149 | 99 |
| HP0537 | BAD13898.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-149 | 99 |
| HP0537 | BAD13980.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-150 | 99 |
| cag16 | AAR03871.1 | Cag16 | Virulence | cag PAI | Protein | 3e-149 | 99 |
| cagM | YP_005779056.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-150 | 99 |
| HP0537 | BAD13789.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-150 | 99 |
| cagM | YP_005774534.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-150 | 99 |
| cag16 | AAR03960.1 | Cag16 | Virulence | cag PAI | Protein | 5e-151 | 99 |
| cagM | AAC44695.1 | CagM | Virulence | cag PAI | Protein | 2e-149 | 99 |
| HP0537 | BAD13925.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-151 | 99 |
| cag16 | AAR03899.1 | Cag16 | Virulence | cag PAI | Protein | 2e-149 | 99 |
| cag16 | AAR03929.1 | Cag16 | Virulence | cag PAI | Protein | 1e-149 | 98 |
| HP0537 | NP_207333.1 | cag pathogenicity island protein (cag16) | Virulence | cag PAI | Protein | 4e-149 | 98 |
| HP0537 | BAD14035.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 6e-148 | 98 |
| cagM | YP_005775737.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-149 | 98 |
| cagM | AGC69800.1 | cag pathogenicity island protein M | Virulence | cag PAI | Protein | 4e-149 | 98 |
| cagM | YP_005777278.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 1e-149 | 98 |
| HP0537 | BAD13870.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-149 | 98 |
| HP0537 | BAD13843.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 2e-149 | 98 |
| cagM | YP_003728727.1 | cag pathogenicity island protein M | Virulence | cag PAI | Protein | 5e-149 | 98 |
| HP0537 | BAD13816.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 7e-147 | 97 |
| HP0537 | BAD14008.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 3e-146 | 97 |
| HP0537 | BAD14062.1 | cag pathogenicity island protein | Virulence | cag PAI | Protein | 4e-141 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSJM_02610 | YP_003928435.1 | cag island protein | VFG0296 | Protein | 2e-149 | 98 |
