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Name : hemC (HPSJM_01310) Accession : YP_003928175.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : 2.5.1.61 Position : 248840 - 249760 bp Length : 921 bp Strand : - Note : COG0181 Porphobilinogen deaminase DNA sequence : ATGGAAAAATTAGTGATTGGCTCTAGGGGGAGCGAATTAGCCTTATGGCAAGCGAACTACATTAAAGAACGCCTGAAAAA AGAATGCTTGATAGAAAGCGAGATTCAAATCGTTAAGACTAAAGGCGATAAAATCTTAGACACCCCTTTAAATAAGATTG GCGGTAAGGGGCTATTCACTAAGGAATTGGAAGAATTGCTTTTAAAAGGCGCAATTGATTTGGCGGTGCATTCTTTAAAA GATGTGCCGGTCGTGTTTGAAAAGGGGTTGGACTTGGCATGCATCACCAAAAGGGCTGATGTGAGGGACACTTTTTTGAG CGTGAAATTCCCTGATTTGATGAGCTTGCCTAAAGGGGCAAAGGTTGGCACGACTTCTTTAAGGCGCTCCATGCAACTCA AGCTGAAACGCCAGGATCTAGACACAGAAAGCTTAAGGGGGAATGTCCAAACCCGTTTGAAAAAGCTTGAATGCGGAGAA TTTGACGCTATCATTTTGGCTGAAGCCGGACTGCAACGCTTAAACGTTCAAGGGGCGAAATACCGCAAAGCTTTTAGCGT AGAAGAAATGATTCCTAGCATGGGTCAGGGGGCTTTAGGGGTAGAAATGCTCAAAAACCACAAGCATTTTGCCACGCTCC AAAAACTCAACGATGAAGAAAGCGCGTTTTGCTGCCATTTAGAAAGGGAATTTATCAAAGGGCTTAATGGGGGGTGTCAG ATCCCTATTGGCGTGCATGCGAGTTTAATGGGCGATAGGGTTAAAATCCAAGCGGTTTTGGGCTTGCCTAATGGGAAAGA AGTCATTGCTAAAGAAAAGCAAGGGGATAAGACTAAGGCGTTTGATTTGGTTCAAGAGCTTTTAGAAGAATTTTTACAAA GCGGGGCGAAAGAGATTTTAGAAAAGGCGCAGTTGTTTTAA Protein sequence : MEKLVIGSRGSELALWQANYIKERLKKECLIESEIQIVKTKGDKILDTPLNKIGGKGLFTKELEELLLKGAIDLAVHSLK DVPVVFEKGLDLACITKRADVRDTFLSVKFPDLMSLPKGAKVGTTSLRRSMQLKLKRQDLDTESLRGNVQTRLKKLECGE FDAIILAEAGLQRLNVQGAKYRKAFSVEEMIPSMGQGALGVEMLKNHKHFATLQKLNDEESAFCCHLEREFIKGLNGGCQ IPIGVHASLMGDRVKIQAVLGLPNGKEVIAKEKQGDKTKAFDLVQELLEEFLQSGAKEILEKAQLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 1e-43 | 45 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 1e-43 | 45 |
