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Name : HPSJM_08080 (HPSJM_08080) Accession : YP_003929483.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : outer membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1464 EC number : - Position : 1637079 - 1637894 bp Length : 816 bp Strand : + Note : COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen DNA sequence : ATGAATGCATTCAAGCGTGTTATTAGTGTGGGAATAATTGCTCTAGGTTTGTTTAACCTTTTAGACGCCAAACACCACAA AGAAAAAAAAGAAGACCACAAAATCACTCGTGAGCTTAAAGTGGGCGCTAACCCTGTGCCGCATGCGCAAATCTTGCAAT CAGTCGTGGACGATTTGAAAGAGAAAGGGATCAAATTAGTGATCGTGTCTTTTACGGATTATGTGTTGCCTAATTTAGCG CTCAATGACGGCTCTTTAGACGCGAATTACTTCCAGCACCGCCCTTATTTGGATCGGTTTAATTTGGACAGAAAAATGCA CCTTGTTGGTTTGGCCAATATCCATGTGGAGCCTTTAAGATTTTATTCTCAAAAAATCACAGACATTAAAAATCTTAAAA AAGGCTCAGTGATTGCTGTGCCAAATGATCCGGCCAATCAAGGCAGGGCGTTGATTTTACTCCATAAACAAGGCCTTATC GCTCTCAAAGACCCAAGCAATCTATACGCTACGGAGTTTGATATTGTCAAAAATCCTTACAACATCAAAATCAAGCCTTT AGAAGCTGCGCTATTGCCTAAAGTTTTAGGGGATGTGGATGGGGCTATCATAACAGGGAATTACGCCTTGCAAGCAAAAC TCACCGGAGCCTTATTTTCAGAAGACAAGGACTCGCCTTATGCCAATCTTGTAGCCTCTCGTGAGGATAACGCGCAAGAT GAAGCCATAAAAGCGCTGATTGAAGCCTTACAAAGCGAAAAGACCAGGAAATTCATTTTGGATACCTATAAGGGGGCGAT TATCCCGGCTTTTTAA Protein sequence : MNAFKRVISVGIIALGLFNLLDAKHHKEKKEDHKITRELKVGANPVPHAQILQSVVDDLKEKGIKLVIVSFTDYVLPNLA LNDGSLDANYFQHRPYLDRFNLDRKMHLVGLANIHVEPLRFYSQKITDIKNLKKGSVIAVPNDPANQGRALILLHKQGLI ALKDPSNLYATEFDIVKNPYNIKIKPLEAALLPKVLGDVDGAIITGNYALQAKLTGALFSEDKDSPYANLVASREDNAQD EAIKALIEALQSEKTRKFILDTYKGAIIPAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAAV_0786 | YP_003281709.1 | ABC transporter substrate-binding protein | Not tested | SaPIAv | Protein | 7e-35 | 41 |
