|
Name : HPSJM_07685 (HPSJM_07685) Accession : YP_003929410.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : Sodium/glutamate symporter Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0786 EC number : - Position : 1547900 - 1549126 bp Length : 1227 bp Strand : - Note : COG0786 Na+/glutamate symporter DNA sequence : TTGCAAGAAATTAAGTTGGATATTTATGCCACTTTGGTGTGCATGGTTTTAGTGCTGCTTTTGGGGCGTTATGTGATTTC TAAAGTCAAGTTTTTGCGCGATTATGATATTCCAGAGCCTGTTGTGGGCGGGGTTTTAGTCGCTTTTTTTATCATGTTAG CGCGTCAGTTTTACAATTTTGGTTTGCAGTTTGATTCTTCTTTAAAAGATCCTTTAATGCTGACTTTTTTTATCACCATT GGTTTGAGCGCGGATTTCAAATCTTTACAAAAAGGCGGCAAAATGCTTGCGGTTTTTTTGCTGGCTGTGGCGGGGTTTGT GGTGTGTCAAAATGCAGTGGGGATTTCTATCGCTAGCCTTTTAGGGGTCAATCCTTTAATGGGGCTTTTAGGGGGCTCTA TCGCTTTAGTGGGAGGGCATGGCACTAGTGCGGCATGGGCTAATTTTTTCACCCAAGCGCCTTATCATTTTAGCTCTAGT TTGGAAGTGGGCATGGCGTGCGCGACTTTTGGCTTGGTGAGTGGGGGGATTATTGGAGGGCCTGTCGCTAAATATTTGAT CTCAAAATACAAACTAGAGCCTAAAGACACTAAAGAAAAAGACACTTTAGAGGGCGTGGCGTCTAAAGGCTTTGAAACCC CTAAAGAGCAGCGCCTAATCACCGCATCCAGTTTTGTAGAAACTTTAGCTTTGATTGCGATCGCTTTATTGGTGGGGACT TTTTTATCGCATTTGATGCCTAAAAGCTTCACCTTGCCGACTTTTGTGTGGTGCTTGTTTGTAGGGGTTATTTTAAGAAA CACCTTGTCGTTTTTTAAGATCCATAGCGTGTTTGACAGAGAGGTTTCAGTTATAGGGAACGTGAGCTTGAGCCTGTTTT TAGCCTACGCTTTAATGAGCGTGAATTTATTGGAATTGTTAAAACTCGCTGTGCCTTTAGCGGTTATTTTGAGCGTTCAA GTGGTGGTTATGATCCTTTATGTGGTGCTTGTAACCTTTAGGGTATGCGGGAAGGATTATGATGCGGCGGTGTTGTGCGC GGGGCATTGCGGTTTTGGGCTTGGAGCGACTCCAACGGCTATGGTGAATATGCAAACCATCACCAACCACTACGGGCCAT CGCATGTAGCGTTTATTGTAGTGCCTTTAGTGGGAGCGTTTTTTGTTGATATTATTAACGCTTTAGCGATTAAAGGCTTT TTGCTTTTGCCTTTTTTCCCATCATGA Protein sequence : MQEIKLDIYATLVCMVLVLLLGRYVISKVKFLRDYDIPEPVVGGVLVAFFIMLARQFYNFGLQFDSSLKDPLMLTFFITI GLSADFKSLQKGGKMLAVFLLAVAGFVVCQNAVGISIASLLGVNPLMGLLGGSIALVGGHGTSAAWANFFTQAPYHFSSS LEVGMACATFGLVSGGIIGGPVAKYLISKYKLEPKDTKEKDTLEGVASKGFETPKEQRLITASSFVETLALIAIALLVGT FLSHLMPKSFTLPTFVWCLFVGVILRNTLSFFKIHSVFDREVSVIGNVSLSLFLAYALMSVNLLELLKLAVPLAVILSVQ VVVMILYVVLVTFRVCGKDYDAAVLCAGHCGFGLGATPTAMVNMQTITNHYGPSHVAFIVVPLVGAFFVDIINALAIKGF LLLPFFPS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gltS | NP_273147.1 | sodium/glutamate symport carrier protein | Not tested | IHT-A | Protein | 7e-73 | 51 |
| unnamed | AEA34672.1 | sodium/glutamate symport carrier protein | Not tested | Not named | Protein | 6e-69 | 49 |
