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Name : HPSJM_07005 (HPSJM_07005) Accession : YP_003929278.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1408465 - 1409532 bp Length : 1068 bp Strand : - Note : COG0582 Integrase DNA sequence : ATGCTAAATAACAAACTCACCAAATCTCAAAGAGAACTCTTTGATAATCTCAAAGTCTTTTTATACACTAAGGTTAAAAA TTTCACTCCTATTCAAGATGTGAATGATATGGCTTTAATCCTAAATACGCAAAACAAAATCTTAAAATGCCATAATGTTG AGCAATTAAGACAACTCTGTCATATTCTTTATAATCAAGGTATCAAACACACCATAATGATGCAAGGCTTGTTTTTATTC TTTGAATACTTTAGAGACAATCTGAAACTAAGAAGTTTTAGAATGCTTAGTGAAGAGCAAGTCATTAACTTTCTTTTTGA ACTCGCTCAAAATAGAAAACCAAGCTCTATGGCTAAGTATGTGATGTATTTAAGGCAATTCTTTGATTACTTGGATAGAA AAAAGCATTATAACTTTGACTTTGCCCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC TACAAGGATTTAAAGAGTTTTTTAAAAACACTTTTAGAATATAAGCCAACCACTAGCTTTGAAAAGCGCAATAAGTGTGT TTTACTCATTGTAATACTAGGAGGGCTTAGAAAATGCGAAGTGTTAAACATAGAGTTAAAACACATTCAAGTAGAAGAAC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGGAAAGAAAGAAAAGCTTATATCAAAAAGAGTTTGTTAGAACTAAGC TTGAATGCTTGGCTTAGTGATGATTGCAGACTAAAATATTTCAATGGAGCATATCTCTTTAAAAAGGATAAGCAAAAATC ACAAAATTCTTTAACGCTTTATAACTTTATCCCCTTAATCTTTAAACTAGCTCAAATCAAACACTATAAGCAATATGGCA CAGGCTTACATCTATTTAGACATAGTTTTGCTACGCTTATCTATCAAGAGACCCAAGACTTAGTTTTAACTTCAAGAGCT TTAGGGCATAGCTCATTACTCTCTACTAAGATTTATATTCATACCACACAAGAGCATAACAAGAAAGTGGCTCTTGTATT TGATAGTTTGATAGAGAATAAGAAGTAA Protein sequence : MLNNKLTKSQRELFDNLKVFLYTKVKNFTPIQDVNDMALILNTQNKILKCHNVEQLRQLCHILYNQGIKHTIMMQGLFLF FEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLN YKDLKSFLKTLLEYKPTTSFEKRNKCVLLIVILGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLELS LNAWLSDDCRLKYFNGAYLFKKDKQKSQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIYIHTTQEHNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 6e-101 | 63 |
