Gene Information

Name : HPSJM_06875 (HPSJM_06875)
Accession : YP_003929252.1
Strain : Helicobacter pylori SJM180
Genome accession: NC_014560
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1373498 - 1374181 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGCAAGATTTAAAACATTTTAAAAATGATATTACGCTCATTCTATCCAAAGAAAGATTAGCCGCTTATGACAGCCTAGA
GCAATACAAAGAAAATTTAAAACTCATTGCTTCTATCACGCCTAAAATCTCTAATTTAGAGATTTATTTACGCAACGCTT
TAGATCATTGTTTAACCCAAATTAAGGGGAGCGATTGGGTGTTTAATGAAAGCGCTTTAACCCCTTTAATCAAAGAATTA
AAAGAAAAGAAAAAAGAAATCACGCATTCTTTAATCTTATCTAAAATGTCTTTAGGGGCAGTGATTAGGCTTATTTTTTG
TTATAAGTTAGAGGGGGTCGTGCTAGATTTGAGAGCGTATCGTTTTAGGGCTTATTATCATGAAAATAAGGATACTTTGC
TTATTAAAAACAGAAAACAAAATCTCTCTAATTATGCCAAAGCCCATATAGCGTTGAACTTGCTATGGACGATTAGAAAT
CGCGCGTATCATTGGGAAAATTTACTCAAAATCCAACCGAACAAGCGCCCACGAATAGCCACACCATTCAATGGAAAAAC
AGAAAACATTCCAATGGACAAAATTTTAGTGATTGGTATTGAACCTAACAAAATCACTCTATTTTTAGATGATTTAATTA
AGAGCATTGGGAATAAAAACTTAGAAAGTTTAAGCAGTTTATAA

Protein sequence :
MQDLKHFKNDITLILSKERLAAYDSLEQYKENLKLIASITPKISNLEIYLRNALDHCLTQIKGSDWVFNESALTPLIKEL
KEKKKEITHSLILSKMSLGAVIRLIFCYKLEGVVLDLRAYRFRAYYHENKDTLLIKNRKQNLSNYAKAHIALNLLWTIRN
RAYHWENLLKIQPNKRPRIATPFNGKTENIPMDKILVIGIEPNKITLFLDDLIKSIGNKNLESLSSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HPP12_0438 YP_002301074.1 hypothetical protein Not tested cag PAI Protein 5e-73 76