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Name : HPSJM_06865 (HPSJM_06865) Accession : YP_003929250.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : integrase/recombinase XercD family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1372341 - 1373312 bp Length : 972 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGAGTGATTGTAAAATGAATAGGGTTAGTAGAGAATTATTTGATAATATTAAGTCATTTTTGCACTATAAGCTTAAAAC AATGATACGCATTCAAAGCGTGAATGATTTGGAATTGATCTTAAAATGGCAAGATAGAGTTTTAGAGTGCCAAAGTCTTA TCGCATTGAAAGAACTCAATCACAAGCTTTATAATCAAGGCGTTAGGCATACGATTATGATGCAAGGCTTGTTTTTGTTC TTTGAATATTTTGATAATAGGATTAAGCTCAAATCCTTGCACAATCTAGCAGAAGAACAGGTTATAGACTTCTTATTTGG ATTAGCCAAAAACAGGAAACCAAGCTCTATGGCTAAATATGTGATGGTTTTAAGACAATTCTTTGATTATTTAGACAGAA AAAGAAACTATAGTTTTGATTTTGAACTTAAAAATCTATCATTTGCCAAGAAAGAAACGCATTTGCCTAAACATTTGAAT AAAAATGATTTTAAGGCTTTTATTCAAGCTCTTCTAAAATACCATCCCAAAACCAGTTTTGAAAAACGCAATCAGTGTAT TTTACTGCTTATTGCATTAGGGGGGTTAAGGAAGTTTGAAGCCTTAGATTTGGAGCTAAAAAACATTGCTTTAGAAAATA ACCACTACCGCCTTTTAATCAAAGGTAAAAACAACAAAGAGAGATACGCTTATATTGAAAAAGAGTTTTTGCAAATTCCT TTGAATGCGTGGCTAAGCGATACTAAACGATTAAAGAGTTTTAAGGGGCGTTTTGTGTTTAAGAAAGCAAAAAACAACAC CACACAAAAAACTTGCTCTTTAAAGGGCTTTATCGCTAAAATTTTTAAGCTCTCTAATATTGATGTAAAATCTTATGGAT TAGGTTTGCATCTTTTTAGGCATAGTTTTGCTACTTTTATTTATGATGAAACACAGGATTTGGTTTTAACTTCAAAGAGC GTTGGGTCATAG Protein sequence : MSDCKMNRVSRELFDNIKSFLHYKLKTMIRIQSVNDLELILKWQDRVLECQSLIALKELNHKLYNQGVRHTIMMQGLFLF FEYFDNRIKLKSLHNLAEEQVIDFLFGLAKNRKPSSMAKYVMVLRQFFDYLDRKRNYSFDFELKNLSFAKKETHLPKHLN KNDFKAFIQALLKYHPKTSFEKRNQCILLLIALGGLRKFEALDLELKNIALENNHYRLLIKGKNNKERYAYIEKEFLQIP LNAWLSDTKRLKSFKGRFVFKKAKNNTTQKTCSLKGFIAKIFKLSNIDVKSYGLGLHLFRHSFATFIYDETQDLVLTSKS VGS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 1e-138 | 96 |
