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Name : HPSJM_05885 (HPSJM_05885) Accession : YP_003929058.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein (nupC) Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 1190956 - 1192212 bp Length : 1257 bp Strand : - Note : COG1972 Nucleoside permease DNA sequence : ATGATTTTTAGCTCTCTTTTTAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCAAGCAATAAAAG GGCTATTAATTATCGCACGATCATCAGTGCCTTTGTGATCCAGGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGCTGCAAGGTTTAGCTAGTGGCATACAAAGCGTGATCGGTTATGGCTATGAAGGGGTGCGTTTCTTGTTT GGCAATCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCGATCAATGTTTTAGCGATCATTAT CTTTTTTGCTAGCTTGATTTCACTCCTATACTATTTAAAAATCATGCCTTTAGTGATCAATCTAATCGGTGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGCGCAGCGGCTAATATTTTTGTAGCGCACACAGAAGCGCCCTTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATTTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCGGG ACCGGTGTTAGCCGGGTATGCGAGCATGGGCATTCCTTTGCCTTATTTAATAGCCGCATCGTTTATGTCCGCTCCTGGGG GTTTGTTGTTCGCTAAAATTATTTACCCGCAAAACGAAACCATTTCTAGCCATGCAGATGTTTCTGCAGAAAAGCATGTC AATGCCATAGAAGCTATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCCTTGCATGTGGGAGCGATGCTTTTAGCCTT TGTGGGGATGCTTGCGCTCATTAACGGGCTTTTAGGGGTTGTAGGGGGGTTTTTAGGCATGGAGCATTTGTCTTTAGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCCTTTATGCTAGGCATTCCTTGGAGCCAGGCCGGGATTGCTGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTACCTTATTTGGGCGATAACCCTCCTTTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACTTTTGCGTTGTGCGGGTTTGCCAACTTAAGCTCAGTCGCTATGCTCATTG GAGGGCTTGGCAGTTTAGTGCCTAAAAAGAAGGATCTCATTATAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCTGGGTTATTCATAGGACTAAACGCTCATTAA Protein sequence : MIFSSLFSVVGMAVLFLIAWVFSSNKRAINYRTIISAFVIQVALGALALYVPLGREMLQGLASGIQSVIGYGYEGVRFLF GNLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADVSAEKHV NAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIIRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 1e-49 | 41 |
