|
Name : HPSJM_00600 (HPSJM_00600) Accession : YP_003928036.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Unknown Product : cysteine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0031 EC number : - Position : 114727 - 115644 bp Length : 918 bp Strand : - Note : COG0031 Cysteine synthase DNA sequence : ATGATCCTTACCGCAATGCAAGACGCCATAGGTCGCACCCCCATTTTTAAATTCACCAGAAAGGATTACCCCATTCCCTT AAAGTCCGCCATTTACGCCAAACTAGAGCATCTAAACCCAGGAGGGAGCGTTAAAGATCGCTTAGGCCAATACCTCATAA AAGAAGCGTTTAGAACGCACAAAATCACTTCCACAACGACCATCATTGAGCCTACCGCAGGCAATACCGGCATCGCTCTA GCCCTAGTGGCGCTCAAGCACCATCTCAAAACCATCTTTGTTGTCCCGGAAAAATTCAGCACAGAAAAACAACAAATCAT GAGAGCTTTGGGGGCTTTAGTGATCAACACGCCTACTAGTGAGGGGATTTCTGGCGCCATTAAAAAAAGTAAAGAATTAG CCGAAAGCATCCCTGATAGCTATTTGCCCTTGCAATTTGAAAACCCTGATAATCCCGCAGCCTACTACCACACCCTAGCC CCTGAAATTGTCCAAGAATTAGGCACAAACCTTACGAGCTTTGTAGCTGGGATAGGGAGTGGTGGCACTTTTGCAGGCAT GGCTAAGTATTTGAAAGAACGCATCCCTAACATTCGCTTGATTGGGGTGGAGCCGGAGGGTTCTATTTTGAATGGGGGAG AGCCTGGGCCTCATGAGATTGAGGGCATTGGCGTGGAGTTCATCCCTCCTTTTTTTGCAAACTTGGATATTGATCGTTTT GAAACGATCTCAGATGAAGAGGGTTTTAACTACACTAGGAAGTTAGCCAAGAAAAACGGCTTATTAGTGGGGAGCTCTAG TGGGGCAGCTTTTGTGGCAGCCTTGAAAGAGGTGCAACGCCTCCCCGAAGGCAGCCAGGTTTTAACCATTTTCCCGGACA TGGCCGATCGTTATCTTTCTAAAGGTATTTATTCATGA Protein sequence : MILTAMQDAIGRTPIFKFTRKDYPIPLKSAIYAKLEHLNPGGSVKDRLGQYLIKEAFRTHKITSTTTIIEPTAGNTGIAL ALVALKHHLKTIFVVPEKFSTEKQQIMRALGALVINTPTSEGISGAIKKSKELAESIPDSYLPLQFENPDNPAAYYHTLA PEIVQELGTNLTSFVAGIGSGGTFAGMAKYLKERIPNIRLIGVEPEGSILNGGEPGPHEIEGIGVEFIPPFFANLDIDRF ETISDEEGFNYTRKLAKKNGLLVGSSSGAAFVAALKEVQRLPEGSQVLTIFPDMADRYLSKGIYS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAS0417 | YP_042544.1 | pyridoxal-phosphate dependent protein | Not tested | vSa¥á | Protein | 2e-38 | 50 |
| SAR0459 | YP_039908.1 | pyridoxal-phosphate dependent protein | Not tested | vSa¥á | Protein | 5e-39 | 50 |
