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Name : HPSJM_00595 (HPSJM_00595) Accession : YP_003928035.1 Strain : Helicobacter pylori SJM180 Genome accession: NC_014560 Putative virulence/resistance : Resistance Product : cystathionine gamma-synthase/cystathionine beta-lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0626 EC number : 4.4.1.8 Position : 113564 - 114706 bp Length : 1143 bp Strand : - Note : COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases DNA sequence : ATGCGCATGCAAACCAAATTAATCCATGGGGGCATTAGTGAAGACGCGACAACGGGGGCGGTGAGCGTGCCTATTTATCA AACTTCCACCTACCGCCAAGACGCCATAGGCCGCCACAAGGGCTATGAATACTCTCGCTCAGGCAACCCCACGCGCTTTG CTTTAGAAGAACTCATCGCTGATTTAGAAGGGGGGGTTAAGGGGTTCGCCTTCGCTTCTGGTTTAGCCGGAATCCACGCT GTCTTTTCCCTCTTGCAATCAGGCGATCATGTGTTATTGGGCGATGATGTCTATGGGGGGACTTTCCGCTTGTTTAATAA GGTGCTTGTCAAAAACGGGCTTTCATGTACCATTATAGACACTAGCGATCTATCCCAAATTAAAAAGGCTATCAAACCCA ACACCAAAGCCCTTTATTTAGAGACCCCTAGTAACCCCTTGCTTAAAATCACCGATTTAGCGCAATGCGCCAGTGTCGCT AAAGATCATGGTTTGCTCACTATCGTGGATAACACTTTCGCCACCCCCTATTGCCAAAACCCGCTTCTTTTGGGGGCGGA CATTGTGGCGCATAGTGGCACAAAATACTTAGGCGGGCATAGCGATGTCGTCGCTGGGCTTGTAACCACCAATAATGAAG CGCTAGCCCAAGAGATCGCTTTTTTCCAAAACGCTATCGGTGGGGTTTTAGGCCCTCAAGACAGCTGGCTGTTGCAAAGA GGGATTAAAACGCTGGGATTGCGCATGGAGGCTCATCAAAAAAACGCCCTTTGCGTGGCTGAATTTTTAGAAAAACACCC TAAAGTGGAAAGGGTTTATTACCCGGGCCTTCCCACCCACCCTAATTACGAGCTAGCCAAAGCCCAAATGCGTGGTTTTA GCGGGATGCTCTCTTTCATTCTTAAAAATGACAGCGAGGCGGCTCTTTTTGTAGAAAGCCTTAAATTATTCATTTTAGGC GAGAGTTTGGGAGGGGTGGAAAGCTTGGTTGGGATTCCGGCGTTTATGACCCATGCGTGTATCCCTAAAGAGCAACGAGA AGCCGCCGGGATTAGAGATGGTTTGGTGCGCTTGTCTGTAGGAATTGAGCATGAACAGGATTTGTTAGAAGATTTAGAGC AAGCGTTCGCTAAAATAAGCTAA Protein sequence : MRMQTKLIHGGISEDATTGAVSVPIYQTSTYRQDAIGRHKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHA VFSLLQSGDHVLLGDDVYGGTFRLFNKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVA KDHGLLTIVDNTFATPYCQNPLLLGADIVAHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQR GIKTLGLRMEAHQKNALCVAEFLEKHPKVERVYYPGLPTHPNYELAKAQMRGFSGMLSFILKNDSEAALFVESLKLFILG ESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SAR0460 | YP_039909.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 2e-96 | 55 |
| SAS0418 | YP_042545.1 | Cys/Met metabolism PLP-dependent enzyme | Not tested | vSa¥á | Protein | 1e-97 | 55 |
| metB | YP_281510.1 | cystathionine beta-lyase | Not tested | Not named | Protein | 2e-71 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPSJM_00595 | YP_003928035.1 | cystathionine gamma-synthase/cystathionine beta-lyase | BAC0207 | Protein | 5e-63 | 44 |
