|
Name : kdpB (LPST_P0008) Accession : YP_003927893.1 Strain : Genome accession: NC_014558 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit KdpB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : - Position : 35191 - 37272 bp Length : 2082 bp Strand : - Note : - DNA sequence : ATGAATGAAAAAATAGAGAAAAATCAAATGTTTAAGCGAAAAATGTTAGGAGCGGCACTTAAAGAAACTTTTCTTAAGTT AAAGCCTAACCTACAAATTAAAAATCCAGTGATGTTTCTAGTTTATGTATCAGCAATTGCAACAACTATCTTATTTATTT TATCGCTTTTTGGCATCTCAGACAGAATTGTAAGTAGTGGTTTTATCTTTACAGTAGCTGTAATTCTTTGGATTACTTGC CTGTTTGCAAACTTTTCAGAGGCTGTCGCTGAAGGGCGCGGTAAAGCTCAAGCGGCAGAGTTGAAAAAATCAAAACGTGC AGTAATGGCAAAAAGGTTAAATAAAGTTGGCGATTTATCAAATATTGAAAAAGTTAGTGGAGAAAACTTAAATAAAGGTG ATCTATTCCTTGCTGAAGCTGGGGAAACCATTGCAGCAGATGGTGAAGTTGTCGAAGGAGCTGCTTCTGTTGACGAGAGT GCAATTACCGGTGAATCTGCGCCGGTAATACGAGAAGCTGGCGGAGATCGCTCTGCTGTTACCGGTGGTACTACTGTTTT ATCAGATCATTTGGTCATCAAGGTAACACAAGAACAAGGTGCTAGTTTTTTGGACAAAATGATTGGAATGGTAGAAGGTG CTAACCGTAAAAAAACGCCTAATGAAATTGCACTAGAAATTTTTTTAGTTGCATTGTCTATCATATTTGTGTTGGTAGTG GCGGCATTATACACGTATTCTCAGTTATCATCTCAGATACTTGATATGAGAAATCCAATGTCTATTGTATGGTTAATTGC ATTACTGGTTTGTTTAGCCCCGACAACCATTGGAGCACTTCTTTCAGCTATCGGTATTGCTGGCATGAGTAGATTGAATC AAGCTAATGTTTTAGCAATGAGTGGTCGGGCCATTGAGGCTGCTGGCGATACCGATGTATTACTCCTGGACAAAACTGGG ACAATAACATTAGGCAATCGACGTGCCTCAGCATTTATTCCAGTCGATGGCCATTCAGAAAAAGAATTAGCAATTGCGGC ACAGCTTTCATCCTTAGCTGATGAGACGCCGGAAGGAAGATCAATTGTTGTATTAGCAAAAGAAAAGTATAGCCTTAGAG AACAGAACTTAGAAGCAAATCAGGCTAAGTTTATTCCATTTTCAGCACAAACTAAAATGAGTGGTGTTAATTTTGCTGGA GATGAAATTCGTAAAGGTGCTTCGGAGAATATCAAACAATATGTCCTGACAAAAAAAAATAAATACAGCGAAGAATGCCA AATAGCAGTTAAGAGAATTGCTGAACAGGGAGGGACACCTTTAGTAGTATGCAAGAATGGTGTTATTCTTGGTGTTATCT ACTTGAAAGATATCATAAAACCCGGCGTTAAGGAAAAATTTGCTGATCTAAGGAAGATGGGCATAAAGACAATCATGATT ACTGGCGATAATCCAGTAACCGCTGCTGCCATTGCTGCTGAAGCTGGGGTTGATAGTTTTCTATCTCAGGCTACTCCAGA AAGTAAAATGAAAACCATTCGTGAATATCAAAATAAGGGACATTTAGTTGCCATGACTGGCGATGGAACTAATGACGCTC CTGCCTTGGCTCAGGCCGACGTTGCTGTAGCTATGAACACGGGTACACAGGCTGCAAAAGAGGCTGGTAATATGGTTGAT CTAGATTCTTCACCAACTAAATTAATTAAAATTGTCCAAATTGGTAAACAATTATTAATGACTCGAGGAAGCTTAACCAC TTTTTCAATTGCAAACGACATTGCTAAGTATTTTGCTATCATTCCGGCTATGTTTGTAGGATTATATCCCAAGTTAAATG TGCTTAACATTATGCATTTGTATAGTCCAACAAGTGCAATCCTGTCAGCATTGATTTTTAACGCACTAATTATTGTCGCC TTAATTCCCCTGGCACTCAAGGGAGTACGTTACCGAGAAGTTCCAGCTAGTCAGTTACTGCGGCATAATTTGCTAGTTTA TGGGCTTGGTGGGATAGTTGTTCCATTCATTGGAATTAAGTTGATCGACTTGATCATTGCACTCATACTACAGATTCTAT GA Protein sequence : MNEKIEKNQMFKRKMLGAALKETFLKLKPNLQIKNPVMFLVYVSAIATTILFILSLFGISDRIVSSGFIFTVAVILWITC LFANFSEAVAEGRGKAQAAELKKSKRAVMAKRLNKVGDLSNIEKVSGENLNKGDLFLAEAGETIAADGEVVEGAASVDES AITGESAPVIREAGGDRSAVTGGTTVLSDHLVIKVTQEQGASFLDKMIGMVEGANRKKTPNEIALEIFLVALSIIFVLVV AALYTYSQLSSQILDMRNPMSIVWLIALLVCLAPTTIGALLSAIGIAGMSRLNQANVLAMSGRAIEAAGDTDVLLLDKTG TITLGNRRASAFIPVDGHSEKELAIAAQLSSLADETPEGRSIVVLAKEKYSLREQNLEANQAKFIPFSAQTKMSGVNFAG DEIRKGASENIKQYVLTKKNKYSEECQIAVKRIAEQGGTPLVVCKNGVILGVIYLKDIIKPGVKEKFADLRKMGIKTIMI TGDNPVTAAAIAAEAGVDSFLSQATPESKMKTIREYQNKGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVD LDSSPTKLIKIVQIGKQLLMTRGSLTTFSIANDIAKYFAIIPAMFVGLYPKLNVLNIMHLYSPTSAILSALIFNALIIVA LIPLALKGVRYREVPASQLLRHNLLVYGLGGIVVPFIGIKLIDLIIALILQIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 68 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 68 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-139 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-139 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 8e-141 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 9e-140 | 56 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-139 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 1e-139 | 56 |
