Gene Information

Name : kdpE (LPST_P0005)
Accession : YP_003927890.1
Strain :
Genome accession: NC_014558
Putative virulence/resistance : Resistance
Product : Kdp operon transcriptional regulatory protein(KdpE)
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 30981 - 31682 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAATAGAATTTTGATTGTCGAAGATGATCCAGAAGTAGCTCGATTAATACAAATGACATTAAGATCCGCAGATTA
TAAGTATGGCATAGCTAGAAATGGCAATAAAACGCTCCAATTTATTCCAATTTTTCAACCAGATGTACTTTTACTTGATC
TAATGTTACCCGATATGGATGGGATGGACATTATTAAGCAAATACGAGCTGCCAACAATAATATACCTATTATTGTTATT
TCAGCGCGTGATGAGGACGCCGACAAAGTGCAGGCTCTAGATTTGGGTGCTGATGATTATTTAACAAAACCCTTTTCTAT
TGATGAATTACTGGCTAGAATTCGTGTTTCCTTGAGAAGGACTAACATAATATATAACAACGGAAAAACCAATATTAATA
ATTATTGTAATGGAGAATTGACTATCAACTTTGATTCACAAACGGTCAAAGTAAACCAAAATGAAATCCATTTAACACCA
ATCGAATATAAGGTTTTGATTATTCTTGCTGAAAACACTTCCCGCGTGTTGACACACCGCTATCTGTTGAAAGAGGTCTG
GGGGACAGAATCGGTTGAAGATACATCTTCTCTTCGAGTGACCATTGCAACTTTGCGAAAAAAGATTGAAGTTAATACTC
AGAATCAGTATATTAAAACACACATTGGAGTCGGTTATCAGATGGTTCAACTAGATAGTTAA

Protein sequence : 
MKNRILIVEDDPEVARLIQMTLRSADYKYGIARNGNKTLQFIPIFQPDVLLLDLMLPDMDGMDIIKQIRAANNNIPIIVI
SARDEDADKVQALDLGADDYLTKPFSIDELLARIRVSLRRTNIIYNNGKTNINNYCNGELTINFDSQTVKVNQNEIHLTP
IEYKVLIILAENTSRVLTHRYLLKEVWGTESVEDTSSLRVTIATLRKKIEVNTQNQYIKTHIGVGYQMVQLDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 7e-33 45
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 7e-33 45
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 7e-33 45
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 7e-33 45
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-33 45
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 5e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE YP_003927890.1 Kdp operon transcriptional regulatory protein(KdpE) AE015929.1.gene1106. Protein 1e-19 41
kdpE YP_003927890.1 Kdp operon transcriptional regulatory protein(KdpE) HE999704.1.gene1528. Protein 2e-23 41