Gene Information

Name : LPST_P0001 (LPST_P0001)
Accession : YP_003927886.1
Strain :
Genome accession: NC_014558
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2826
EC number : -
Position : 25554 - 26477 bp
Length : 924 bp
Strand : +
Note : -

DNA sequence :
ATGAGCACCACTATTTTATCATTCCAGAACCGTGTTGTCATTGAAACGCTTCATAATGAAGGACGTTCCTTGCGATACAT
CGCTAACTACTTAGGCTTTAGTAAGACCACCATCTTTAACGAACTTCACCGGCTAAATAGTGAGTACCAGGCTGGGCTAG
CGCAAACTGACTTTGAACGAAAGGTTAGTCAACGGGGGCGGAAGTCTTCGCTCACTAAAAACCTTAAACACTTGATCGAG
GAAAAGATTCAAGTCCATAAGTGGTCCCCTGAACAAGTTGCCCATGTGGTGGGGATTGCCTACAAGACGGTCTATAACTG
GATTGATCAAGGATGGCTTGATATACAGTTGCCCGATTTGCCTGATCATGGAATTCGTCGTCATCGTGCTAAAGAAAAGC
GTGGTACGTTCAATCACGGCCGCTCCATTGAGGAGCGGCCTCATAAAGTCGAAACTCGCCAGGAATTCGGCCACTTTGAA
GCTGATACCGTACTTTCTGGTAAACGTAAAGGTCAAGCTGTGGCTACTTTTGTGGAGCGTAAGAGTCGCCTGACAATTGT
TAAACGGCTCCATGGTCGCGACAGTCAGTCCATGACTCAAGCCGTACTTGAACTAGCTAGTCAACTTCAAGACAAGCTCA
AGACGCTTACCGTAGATCATGGTAAAGAGTTCGCTAACTATCAGACAATTGAACGGCGAACTGGTACACAGGTTTATTTT
GCACATGCCTATTCACCGCATGAAAGAGGCAGTAATGAGAACCGTAACCGAGTTTTGCGGCGCTTTATTCCCAAAGGCCA
AGCCATTGAAGAACTAAGTGATCACCAACTGGTTCAAATCAACTGGTATTTGAATTCACGGCCACTTAAATGTCTTAATT
GGCATACACCAATCGAGATCTTCTTGCTTAATTTACGTCATTAA

Protein sequence :
MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIE
EKIQVHKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFE
ADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERRTGTQVYF
AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDHQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0085 YP_039551.1 transposase Not tested Type-II SCCmec Protein 4e-43 41
unnamed BAC67550.1 putative transposase Not tested Type-IVc SCCmec Protein 3e-43 41