Name : LPST_P0001 (LPST_P0001) Accession : YP_003927886.1 Strain : Genome accession: NC_014558 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2826 EC number : - Position : 25554 - 26477 bp Length : 924 bp Strand : + Note : - DNA sequence : ATGAGCACCACTATTTTATCATTCCAGAACCGTGTTGTCATTGAAACGCTTCATAATGAAGGACGTTCCTTGCGATACAT CGCTAACTACTTAGGCTTTAGTAAGACCACCATCTTTAACGAACTTCACCGGCTAAATAGTGAGTACCAGGCTGGGCTAG CGCAAACTGACTTTGAACGAAAGGTTAGTCAACGGGGGCGGAAGTCTTCGCTCACTAAAAACCTTAAACACTTGATCGAG GAAAAGATTCAAGTCCATAAGTGGTCCCCTGAACAAGTTGCCCATGTGGTGGGGATTGCCTACAAGACGGTCTATAACTG GATTGATCAAGGATGGCTTGATATACAGTTGCCCGATTTGCCTGATCATGGAATTCGTCGTCATCGTGCTAAAGAAAAGC GTGGTACGTTCAATCACGGCCGCTCCATTGAGGAGCGGCCTCATAAAGTCGAAACTCGCCAGGAATTCGGCCACTTTGAA GCTGATACCGTACTTTCTGGTAAACGTAAAGGTCAAGCTGTGGCTACTTTTGTGGAGCGTAAGAGTCGCCTGACAATTGT TAAACGGCTCCATGGTCGCGACAGTCAGTCCATGACTCAAGCCGTACTTGAACTAGCTAGTCAACTTCAAGACAAGCTCA AGACGCTTACCGTAGATCATGGTAAAGAGTTCGCTAACTATCAGACAATTGAACGGCGAACTGGTACACAGGTTTATTTT GCACATGCCTATTCACCGCATGAAAGAGGCAGTAATGAGAACCGTAACCGAGTTTTGCGGCGCTTTATTCCCAAAGGCCA AGCCATTGAAGAACTAAGTGATCACCAACTGGTTCAAATCAACTGGTATTTGAATTCACGGCCACTTAAATGTCTTAATT GGCATACACCAATCGAGATCTTCTTGCTTAATTTACGTCATTAA Protein sequence : MSTTILSFQNRVVIETLHNEGRSLRYIANYLGFSKTTIFNELHRLNSEYQAGLAQTDFERKVSQRGRKSSLTKNLKHLIE EKIQVHKWSPEQVAHVVGIAYKTVYNWIDQGWLDIQLPDLPDHGIRRHRAKEKRGTFNHGRSIEERPHKVETRQEFGHFE ADTVLSGKRKGQAVATFVERKSRLTIVKRLHGRDSQSMTQAVLELASQLQDKLKTLTVDHGKEFANYQTIERRTGTQVYF AHAYSPHERGSNENRNRVLRRFIPKGQAIEELSDHQLVQINWYLNSRPLKCLNWHTPIEIFLLNLRH |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
SAR0085 | YP_039551.1 | transposase | Not tested | Type-II SCCmec | Protein | 4e-43 | 41 |
unnamed | BAC67550.1 | putative transposase | Not tested | Type-IVc SCCmec | Protein | 3e-43 | 41 |