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Name : HPPC_04955 (HPPC_04955) Accession : YP_003927257.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : IS606 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 1002743 - 1004041 bp Length : 1299 bp Strand : - Note : COG0675 Transposase and inactivated derivatives DNA sequence : TTGTACCCCACTAAAGAACAAGAAAGCAAACTGCAACATTGTTTTTTTGTCTATAACCAAGCCTATAACATCGGCTTGAA TTTGCAACAAGAGCAGTATGAAAAGAATAAAGATTTACCTCCAAAAGAAAGAAAATGGAAAAAATCAAGCGAGTTAGATC ATGCGATCAAACAATGCCTAAGAGCTAGAGATTTACCCTTTAGCTCTGTGATAGCCAAACAATCACGCATGAATGTTGAA AGGGCTTTTAAAGACGCTTTTAAGGTTAAGAACAGGGGCTTTCCTAAATTCAAAAACTCCAAATTCGCCAAACAATCTTT TTCTTGGAACAATCAAGGCTTCTCTTTCAAAGAAAGCGCTGATGAACGCTTCAAGATATTCACCCTCATGAAAATGCCCT TGCTTTTGCGCATGCACAGAGATCCCCCCCCTAACGCTAAAATCAAGCAAATTACAATCTCTTGCAGCCACAGAAAATAT TTTGTTAGCTTTAGCGTGGAATACGAACAAAACATTGCTACCATCAAAAATCCTAAAGATTGTGTGGGGCTAGATTTGAA TATTCTTGACATCGCTTGTTCTTGTGGTGTGAATAACCCTGAAAAACTCACTGATTTTAAGCGCTACCTTTTAGACATGG AAGAATTGCTAGGGATAAAGTTGGATGCAAAAACTCACGCAACACAGCTTATTCCCACTTATTCCAAACTGCATTCTTTA AAAAAATACTCCAAAAAATCTAAAAAATTGCAAAGAAAACAGAGCCGCAGGGTTTTAAAATCCAAACAGAACAAAACCAA ATTAGGAGGTAATTTTTACCAAACGCAAAAGAGATTGAACCAAGCCTTTGACAAGTCTAGTCATCAAAAAACAGACCGAT ACCATAAAATCACAAGCGAACTTTCAAAGCAATTTGAATTGATAGCAGTTGAAGACTTGCAAGTAAAGAACATGACTAAA AGAGCCAAGCTCAAAAATGTTAAACAAAAGAGTGGGCTTAATCGATCTATTCTCAACACTTCATTCTATCAAATCATCTT CTTTTTAGACTATAAACAACAGCATAATGGCAAATTGTTAGTGAAAGTTCCCCCACAATACACGAGCAAGACTTGCTATA ATTGTGGGAGCATCAACCCCAAGCTCAAATTGAATCACAGGCAATATTTGTGTTCTGATTGTGGGTATAAAGAACACAGA GATATTAACGCTGCGAACAACATCTTGAATAAAGGGTTAAGTCTTTTTAGGGCAGGAAATGTCCTTGCAGACTTTAAAGA ACAAAGCCTTTCGTGTTAG Protein sequence : MYPTKEQESKLQHCFFVYNQAYNIGLNLQQEQYEKNKDLPPKERKWKKSSELDHAIKQCLRARDLPFSSVIAKQSRMNVE RAFKDAFKVKNRGFPKFKNSKFAKQSFSWNNQGFSFKESADERFKIFTLMKMPLLLRMHRDPPPNAKIKQITISCSHRKY FVSFSVEYEQNIATIKNPKDCVGLDLNILDIACSCGVNNPEKLTDFKRYLLDMEELLGIKLDAKTHATQLIPTYSKLHSL KKYSKKSKKLQRKQSRRVLKSKQNKTKLGGNFYQTQKRLNQAFDKSSHQKTDRYHKITSELSKQFELIAVEDLQVKNMTK RAKLKNVKQKSGLNRSILNTSFYQIIFFLDYKQQHNGKLLVKVPPQYTSKTCYNCGSINPKLKLNHRQYLCSDCGYKEHR DINAANNILNKGLSLFRAGNVLADFKEQSLSC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAR03857.1 | transposase B-like protein | Not tested | cag PAI | Protein | 4e-159 | 85 |
| tnpA | CAJ31329.1 | insertion sequence IS606 transposase homolog A | Not tested | cag PAI | Protein | 3e-156 | 84 |
