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Name : HPPC_04420 (HPPC_04420) Accession : YP_003927156.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 884011 - 885537 bp Length : 1527 bp Strand : - Note : COG0753 Catalase DNA sequence : ATGGTTAATAAAGATGTGAAACAAACCACCGCTTTTGGTGCTCCCGTTTGGGATGACAACAATGTGATTACGGCTGGCCC TAGAGGTCCTGTTTTATTACAAAGCACTTGGTTTTTGGAAAAGTTAGCGGCGTTTGACAGAGAAAGGATCCCTGAAAGGG TAGTGCATGCTAAAGGAAGCGGAGCTTATGGCACTTTCACCGTGACTAAAGACATCACTAAATACACTAAAGCGAAAATT TTCTCTAAAGTGGGCAAAAAAACCGAATGCTTTTTCAGATTTTCTACTGTGGCAGGGGAAAAAGGCAGTGCGGATGCGGT GAGAGACCCTAGAGGTTTTGCGATGAAGTATTACACTGAAGAAGGTAACTGGGATTTAGTAGGGAACAACACGCCTGTTT TCTTTATCCGTGACGGGATCAAATTCCCTGATTTCATCCACACTCAAAAACGAGATCCTCAAACCAATTTGCCTAACCAC GACATGGTATGGGATTTTTGGAGTAATGTTCCTGAAAGTTTGTATCAAGTAACATGGGTTATGAGCGATAGAGGTATTCC TAAATCTTTCCGCCACATGGATGGTTTTGGCAGCCACACTTTCAGCCTTATCAACGCAAAAGGCGAACGCTTTTGGGTGA AATTCCACTTTCACACCATGCAAGGCGTTAAGCACTTGACTAATGAAGAAGCTGCAGAAATCAGAAAGCATGATCCTGAT TCCAATCAAAGGGATTTATTCAATGCGATCGCTAGAGGGGATTTCCCAAAATGGAAATTAAGCATTCAAGTGATGCCAGA AGAAGATGCTAAAAAGTATCGATTCCATCCGTTTGATGTGACTAAAATTTGGTATCTCCAAGATTATCCATTGATGGAAG TGGGCATTGTAGAGTTGAATAAAAATCCTGAAAACTATTTCGCAGAAGTGGAGCAAGCGGCATTCGCTCCGTCTAATGTC GTTCCTGGAATTGGCTATAGCCCTGATAGGATGTTACAAGCTCGCTTGTTCTCTTATACAGACACACAACGCTACCGCTT AGGGGTTAATTATCCTCAGATACCGGTCAATAAACCAAGGTGTCCGTTCCACTCTTCTAGCAGAGATGGTTACATGCAAA ACGGATACTACGGCTCTTTACAAAACTATACGCCTAGCTCATTGCCTGGCTATAAAGAAGATAAGAGCGCGAGAGATCCT AAGTTCAACTTAGCTCATATTGAGAAAGAGTTTGAAGTGTGGAATTGGGATTACAGAGCTGATGATAGCGATTACTACAC CCAACCAGGCGATTACTACCGCTCATTGCCAGCTGATGAAAAAGAAAGGTTGCATGACACTATTGGGGAGTCTTTAGCTC ATGTTACCCATAAAGAAATTGTGGATAAACAATTGGAGCATTTCAAGAAAGCTGATCCCAAATACGCTGAGGGAGTTAAA AAAGCTCTTGAAAAACACCAAAAAATGATGAAAGACATGCATGACATGCATGGAAAAGACATGCACCACATGAAAAAGAA AAAGTAA Protein sequence : MVNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDITKYTKAKI FSKVGKKTECFFRFSTVAGEKGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDGIKFPDFIHTQKRDPQTNLPNH DMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRKHDPD SNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQAAFAPSNV VPGIGYSPDRMLQARLFSYTDTQRYRLGVNYPQIPVNKPRCPFHSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDP KFNLAHIEKEFEVWNWDYRADDSDYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVK KALEKHQKMMKDMHDMHGKDMHHMKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-133 | 59 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 8e-93 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 1e-90 | 47 |
