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Name : HPPC_04160 (HPPC_04160) Accession : YP_003927108.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : homoserine dehydrogenase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0460 EC number : 1.1.1.3 Position : 836452 - 837717 bp Length : 1266 bp Strand : + Note : COG0460 Homoserine dehydrogenase DNA sequence : ATGAAAAAAAGATTGAATGTAGGGCTTGTGGGTTTAGGGTGTGTGGGGAGCGCGGTCGCTAAAATCTTACAAGAAAATCA AGAAATCATCAAAGACAGAGCCGGCGTGGAAATTAAAATTAAAAAAGCGGTGGTGCGAGACGTGAAAAAGCACAAAGGCT ACCCTTTTGAAATCAGTGATGATTTAGAAAGCCTGATAGAAGATGAAGAAATTGATATTGTCGTGGAGCTTATGGGTGGG GTGGAAGCGCCTTATCTTTTAGCTAAAAAAACTTTAGCCAAACAAAAAGCCTTCGTTACAGCCAATAAAGCCATGTTAGC GTATCACCGCTATGAATTAGAACAAATCGCTAAAAACACCCCCATAGGCTTTGAAGCGAGCGTGTGCGGGGGTATCCCTA TTATCAAGGCTTTAAAAGACGGCTTGAGCGCTAATCACATCCTTTCTTTTAAAGGGATTTTAAACGGCACTAGCAATTAC ATTTTAAGCCAGATGTTTAAAAATCAAGCAAGCTTTAAGGACGCTTTGAAAGACGCCCAACATTTAGGCTATGCGGAATT AAACCCTGAATTTGACATTAAAGGCATTGATGCGGCACACAAATTATTGATTTTAGCGTCTTTAGCCTATGGCATTGATG CAAAATTAGAAGAAATTTTAATTGAAGGCATTGAAAAAATAGAGCCAGATGACATGGAGTTTGCTAAAGAATTTGGTTAT AGCATTAAACTTTTAGGCATCGCTAAAAAACACCAAGATTGCATTGAATTAAGGGTGCATCCAAGCATGATTAAAAATGA ATGCATGCTCTCTAAAGTGGATGGGGTAATGAACGCTATAAGCGTTATAGGGGATAAGGTGGGCGAGACTTTGTATTATG GGGCTGGGGCTGGGGGAGAGCCTACCGCAAGCGCGGTCATTAGCGATATTATAGAAATCGCAAGGAAAAAAAGCTCTCTA ATGCTAGGCTTTGAAACCCCTCAAAAACTCCCCCTAAAACCCAAAGAAGAAATCCAATGCGCTTATTATGCGCGTTTGCT AGTGAGCGATGAAAAAGGGGTTTTTTCTCAAATTAGCGCGATTTTAGCCCAAAATGATATTTCGCTCAACAATGTTTTAC AAAAAGAAATCCCGCATTCCAACAAGGCTAAAATCTTATTTTCCACGCACACCACCAACGAAAAATCTATGTTAAACGCC CTTAAAGAGCTTGAAAATCTAAAAAGCGTGCTAGACACCCCTAAGATGATCCGTTTGGAAAATTGA Protein sequence : MKKRLNVGLVGLGCVGSAVAKILQENQEIIKDRAGVEIKIKKAVVRDVKKHKGYPFEISDDLESLIEDEEIDIVVELMGG VEAPYLLAKKTLAKQKAFVTANKAMLAYHRYELEQIAKNTPIGFEASVCGGIPIIKALKDGLSANHILSFKGILNGTSNY ILSQMFKNQASFKDALKDAQHLGYAELNPEFDIKGIDAAHKLLILASLAYGIDAKLEEILIEGIEKIEPDDMEFAKEFGY SIKLLGIAKKHQDCIELRVHPSMIKNECMLSKVDGVMNAISVIGDKVGETLYYGAGAGGEPTASAVISDIIEIARKKSSL MLGFETPQKLPLKPKEEIQCAYYARLLVSDEKGVFSQISAILAQNDISLNNVLQKEIPHSNKAKILFSTHTTNEKSMLNA LKELENLKSVLDTPKMIRLEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00305 | YP_008207770.1 | Homoserine dehydrogenase | Not tested | AbaR25 | Protein | 2e-58 | 42 |
| BJAB0868_00309 | YP_008211635.1 | Homoserine dehydrogenase | Not tested | AbaR26 | Protein | 2e-58 | 42 |
