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Name : HPPC_03840 (HPPC_03840) Accession : YP_003927044.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG2056 EC number : - Position : 769653 - 770966 bp Length : 1314 bp Strand : + Note : COG2056 Predicted permease DNA sequence : ATGCTAGAAAATAGCTCTATATGGAGCAATCCTGCCTTTGTGGCTATCATTTGCATGTGCGTTCTTAGCCTTTTAAGGCT CAATGTCATGCTTTCTATGATAAGTGCGACTCTCATAGCAGGACTTATGGGAGGGCTTGGGATCACGGAAAGTTTTAATG CAATGATAGATGGCATGAAAGGCAATTTAAACATCGCTTTAAGCTACATCCTTTTAGGGGCTTTAGCGGTAGCGATCGCT AAAAGCAATCTCATTAAAGTCGCTTTGAATAAATTAATAGGTCTAATGAATTACAAGCGATCCACTTTTTGCTTTTTGAT CGCTTTCATCGCATGTTTTTCGCAAAATTTAGTGCCGGTGCATATCGCTTTTATCCCTATTTTAATCCCCCCTCTTTTGC ATTTAATGAACCGGCTAGAATTGGATAGAAGAGCGGTCGCTTGCGCTTTAACCTTTGGCTTGCAAGCCCCCTACTTGGTG CTTCCTGTAGGGTTTGGCTTGATTTTTCAAACCACCATTTTAGAGCAATTAAAAGCTAATGGCGTTAGCGCTACCCTAGC GCAAATCACAGGAGTGATGTGGATAGCGGGGTTAGCGATGGTTGTTGGGCTATTTGTCGCTGTATTAACGCTATACAAAA AACCTAGACACTACAAAGAAAAATCTTTTAACATAGAAAATTACGACTCGCTTAAATTAAACTACCATGACTACTTGACT TTTATAGGGATTATCGTGGCGTTTGTGATCCAATTAGCCACCGATTCGATGCCCTTAGCCGCCTTTTTAGCGTTAGCGAT CATCTTATTAGGCCGTGGCATTAAGTTTAAAGAAACAGATTCGCTTATGGATGATAGCGTGAAAATGATGGCGTTTATCG CTTTTGTGATGTTAGTGGCTAGCGGGTTTGGAGAAGTGTTGCAAAAAGTGCATGCGATAGAGGGATTAGTGAATGCGATC ACAAGCGTAGTCCAAGGGAAGCTTTTAGGGGCTTTTTTAATGCTTGTTGTAGGGCTTTTTATCACTATGGGGATAGGGAC TTCTTTTGGCACTATTCCTATCATCGCTGTGTTTTATGTCCCTTTATGCGCGAAATTAGGTTTTAGCATAGAATCTACGA TTTTACTCATCGGCATAGCCGCAGCTTTAGGCGATGCAGGCTCACCGGCTAGCGATAGCACCATGGGGCCCACTTGCGGG CTTAACGCAGACAACCAACACAATCATATCTATGACACATGCGTGCCGACTTTTTTAGTCTATAATCTCCCTTTGATTGT TTTTGGAGTGGTTGGAGCGTTACTATTAGGCTAA Protein sequence : MLENSSIWSNPAFVAIICMCVLSLLRLNVMLSMISATLIAGLMGGLGITESFNAMIDGMKGNLNIALSYILLGALAVAIA KSNLIKVALNKLIGLMNYKRSTFCFLIAFIACFSQNLVPVHIAFIPILIPPLLHLMNRLELDRRAVACALTFGLQAPYLV LPVGFGLIFQTTILEQLKANGVSATLAQITGVMWIAGLAMVVGLFVAVLTLYKKPRHYKEKSFNIENYDSLKLNYHDYLT FIGIIVAFVIQLATDSMPLAAFLALAIILLGRGIKFKETDSLMDDSVKMMAFIAFVMLVASGFGEVLQKVHAIEGLVNAI TSVVQGKLLGAFLMLVVGLFITMGIGTSFGTIPIIAVFYVPLCAKLGFSIESTILLIGIAAALGDAGSPASDSTMGPTCG LNADNQHNHIYDTCVPTFLVYNLPLIVFGVVGALLLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CpC231_1474 | YP_005683838.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| CpI19_1481 | YP_005685924.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| Cp1002_1472 | YP_005681739.1 | Na+/H+ antiporter NhaC | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
| cpfrc_01481 | YP_003783881.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-58 | 41 |
