Gene Information

Name : HPPC_02705 (HPPC_02705)
Accession : YP_003926829.1
Strain : Helicobacter pylori PeCan4
Genome accession: NC_014555
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 533307 - 533654 bp
Length : 348 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATTTTTTACAAGAATCACTGACAGCTACAAGAAAGTTGTAGTAACTTTAGGGCTAGTGATGACAACCAATCCTTT
AATGGCGGTCACCAGTCCTGCAACAGGCGTTACTGAGACTAAAACTTTGGTTATTCAGATCATTTCTGTTCTAGCGATCG
TAGGTGGTTGCGCTTTAGGGGTCAAAGGCATAGCAGATATTTGGAAAATCTCTGATGACATCAAAAGAGGTCAGGCGACT
GTTTTTGCTTACGCGCAACCCATAGCTATGTTAGCGGTGGCAGGCGGTATTATCTTTTTGAGCACTAAGTTTGGCTTCAA
TATTGACGAGGGTGGAGGAGCTAGCTAA

Protein sequence : 
MKFFTRITDSYKKVVVTLGLVMTTNPLMAVTSPATGVTETKTLVIQIISVLAIVGGCALGVKGIADIWKISDDIKRGQAT
VFAYAQPIAMLAVAGGIIFLSTKFGFNIDEGGGAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0546 BAD13934.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-47 99
cag25 AAR03938.1 Cag25 Virulence cag PAI Protein 2e-41 98
cagC AGC69805.1 cag pathogenicity island protein C Virulence cag PAI Protein 7e-47 97
cag25 AAR03908.1 Cag25 Virulence cag PAI Protein 3e-41 97
HP0546 BAD13907.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-46 96
cagC YP_003728718.1 cag pathogenicity island protein C Virulence cag PAI Protein 3e-36 96
HP0546 NP_207342.1 cag pathogenicity island protein (cag25) Virulence cag PAI Protein 1e-40 96
cagC NP_223212.1 cag island protein Virulence cag PAI Protein 7e-41 96
cag25 AAR03880.1 Cag25 Virulence cag PAI Protein 2e-46 95
HP0546 BAD14017.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 95
cagC YP_005774525.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-45 94
cagC YP_005779047.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-45 94
HP0546 BAD14071.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 94
cagC YP_005775746.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 94
HP0546 BAD13798.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 94
cagC AAC44704.1 CagC Virulence cag PAI Protein 5e-40 94
HP0546 BAD13879.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 94
cag25 AAR03969.1 Cag25 Virulence cag PAI Protein 6e-40 94
HP0546 BAD13962.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-46 93
HP0546 BAD13825.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-45 93
HP0546 BAD13989.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-45 93
cagC YP_005777287.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-44 92
HP0546 BAD13852.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-39 91
HP0546 BAD14044.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-45 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC_02705 YP_003926829.1 cag pathogenicity island protein C VFG0305 Protein 4e-41 96