Gene Information

Name : HPPC_02670 (HPPC_02670)
Accession : YP_003926822.1
Strain : Helicobacter pylori PeCan4
Genome accession: NC_014555
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 526152 - 527291 bp
Length : 1140 bp
Strand : -
Note : -

DNA sequence : 
GTGAAATATTTTTTAAGCATATTTTCTTTCTTAACTTTTTTGTTTCTGAATGGTGGAGAGGCAGTAATAACGCTTGAACC
TGCCTTAAAAGCCATTCAAGCGGATGCACAAGCCAAACAAAAAACCGCTCAAGCCGAATTAAAAGCCATAGAGGCTCAAT
CTAATGCCAAAGAAAAAGCCATTCAAGCGCAAATAGAGGGAGAATTGAGGACTCAGCTTGCAACTATGAGCGCTATGTTA
AAAGGGGCTAATGGCGTTATTAATGGTGTCAATGGCATGACAGGGGGGTTTTTTGCAGGTTCAGACATCTTGCTTGGCGT
CATGGAAGGGTATTCAAGCGCGCTTAGCGCATTGGGGGGGAATGTCAAAATGATCGTGGAAAAACAAAAAATTAACACCC
AAACAGAAATCCAAAACATGCAAATTGCGCTCCAAAAAAATAACGAAATAATCAAGCTCAAAATGAACCAGCAAAACGCT
CTCTTAGAAGCGTTAAAAAACAGCTTTGAACCGAGCGTTACTCTAAAAACACAAATGGAAATGCTTTCTCAAGCTCTAGG
AAGTTCTTCTGACAACGCTCAATACATCGCTTACAATACGATTGGTATCAAGGCGTTTGAAGAAACCTTAAAAGGTTTTG
AAACATGGTTGAAAACAGCTATGCAAAAAGCGACCCTTATTGATTATAATTCCCTAACAGGTCAGGCTTTGTTTCAAAGC
GCCATCTACGCGCCTGCTCTTAGTTTTTTTTCAAGCATGGGCGCACCATTTGGAATCATTGAAACATTCACTCTAGCACC
CACAAAATGCCCCTATCTTGATGGGCTAAAAATTTCAGCATGCCTTATGGAACAGGTTATTCAGAATTACAGAATGATTG
TAGCCCTTATTCAAAATAAACTGAGTGATGCAGATTTTCAAAATATCGCTTATTTGAATGGGATCAATGGAGAAATCAAA
ACCTTAAAAGGATCAGTAGATTTGAACGCACTCATAGAAGTTGCTATCTTAAACGCAGAAAATCATTTAAACTATATAGA
GAATCTTGAAAAAAAAGCCGACCTTTGGGAAGAACAACTGAAATTAGAAAGAGAAACGACAGCAAGAAACATTGCTAGCT
CTAAAGTTATTGTCAAATGA

Protein sequence : 
MKYFLSIFSFLTFLFLNGGEAVITLEPALKAIQADAQAKQKTAQAELKAIEAQSNAKEKAIQAQIEGELRTQLATMSAML
KGANGVINGVNGMTGGFFAGSDILLGVMEGYSSALSALGGNVKMIVEKQKINTQTEIQNMQIALQKNNEIIKLKMNQQNA
LLEALKNSFEPSVTLKTQMEMLSQALGSSSDNAQYIAYNTIGIKAFEETLKGFETWLKTAMQKATLIDYNSLTGQALFQS
AIYAPALSFFSSMGAPFGIIETFTLAPTKCPYLDGLKISACLMEQVIQNYRMIVALIQNKLSDADFQNIAYLNGINGEIK
TLKGSVDLNALIEVAILNAENHLNYIENLEKKADLWEEQLKLERETTARNIASSKVIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0540 BAD14038.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-150 99
HP0540 BAD13873.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-150 99
cagI YP_005775740.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-150 99
cag19 AAR03902.1 Cag19 Virulence cag PAI Protein 5e-150 99
cagI YP_003728724.1 cag pathogenicity island protein I Virulence cag PAI Protein 6e-150 99
cag19 AAR03874.1 Cag19 Virulence cag PAI Protein 3e-150 99
HP0540 NP_207336.1 cag pathogenicity island protein (cag19) Virulence cag PAI Protein 4e-150 99
cagI AAF80208.1 CagI Virulence cag PAI Protein 3e-150 99
cagI NP_223206.1 cag island protein Virulence cag PAI Protein 3e-150 99
cag19 AAR03963.1 Cag19 Virulence cag PAI Protein 9e-151 99
cagI AGC69802.1 cag pathogenicity island protein I Virulence cag PAI Protein 1e-149 99
cag19 AAR03932.1 Cag19 Virulence cag PAI Protein 1e-149 98
HP0540 BAD13983.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-145 98
HP0540 BAD13928.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-148 98
HP0540 BAD13956.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-149 98
cagI YP_005774531.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
HP0540 BAD13819.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-145 96
cagI YP_005777281.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-146 96
HP0540 BAD13846.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-146 96
HP0540 BAD13792.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-146 96
cagI YP_005779053.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-146 96
HP0540 BAD14065.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-145 95
HP0540 BAD14011.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-145 95
HP0540 BAD13901.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-145 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC_02670 YP_003926822.1 cag pathogenicity island protein I VFG0299 Protein 2e-150 99