Gene Information

Name : HPPC_02665 (HPPC_02665)
Accession : YP_003926821.1
Strain : Helicobacter pylori PeCan4
Genome accession: NC_014555
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein L
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 525442 - 526155 bp
Length : 714 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACACTCGTGAAAAATACCCTATTTTCTTTTTTGCTATTGTCTGTTTTGATGGCAGAAGATATAACAAGCGGCTT
AAAGCAACTGGATAGCACCTACCAAGAGACCAACCAGCAAGTGCTCAAAAACCTAGATGAGATTTTTTCAACCACTAGCC
CTAGCGCTAATAATGAAATAGGTCAAGAAGATGCTCTAAACATCAAAAAAGCGGCCATGGCTTTGAGGGGAGATTTAGCG
TTATTGAAAGCCAATTTTGAAGCGAATGAGTTATTTTTCATCTCAGAAGATGTGATTTTCAAGACTTATATGTCTAGCCC
TGAACTTTTATTAACCTATATGAAAATCAATCCCTTAGACCAAAATACTGCTGAGCAACAATGCGGAATATCCGATAAAG
TTTTAGTTCTTTATTGTGAAGGGAAGCTGAAAATCGAGCAAGAAAAACAAAATATAAGAGAGCGTTTAGAAACTTCCCTA
AAGGCGTATCAGAGCAACATTGGAGGTACAGCTTCTTTAATTACTGCTTCACAGACGCTTGTAGAAAGCCTAAAGAATAA
AAATTTCATCAAAGGAATCAGAAAGCTTATGTTAGCTCACAACAAGGTCTTTTTAAATTATTTAGAGGAGTTGGACGCAT
TAGAAAGATCCCTAGAACAAAGCAAGCGACAATACCTACAAGAAAGGCAATCAAGTAAGATCATTGTCAAATGA

Protein sequence : 
MKTLVKNTLFSFLLLSVLMAEDITSGLKQLDSTYQETNQQVLKNLDEIFSTTSPSANNEIGQEDALNIKKAAMALRGDLA
LLKANFEANELFFISEDVIFKTYMSSPELLLTYMKINPLDQNTAEQQCGISDKVLVLYCEGKLKIEQEKQNIRERLETSL
KAYQSNIGGTASLITASQTLVESLKNKNFIKGIRKLMLAHNKVFLNYLEELDALERSLEQSKRQYLQERQSSKIIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cagL AAC44697.1 CagL Virulence cag PAI Protein 2e-102 99
cag18 AAR03873.1 Cag18 Virulence cag PAI Protein 3e-103 99
cagL AGC69801.1 cag pathogenicity island protein L Virulence cag PAI Protein 1e-101 98
HP0539 BAD14037.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-102 98
cag18 AAR03901.1 Cag18 Virulence cag PAI Protein 1e-102 98
HP0539 NP_207335.1 cag pathogenicity island protein (cag18) Virulence cag PAI Protein 3e-102 98
cag18 AAR03931.1 Cag18 Virulence cag PAI Protein 1e-102 98
cagL NP_223205.1 cag island protein Virulence cag PAI Protein 2e-102 98
HP0539 BAD13927.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-102 97
cagL YP_005775739.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-100 97
cagL YP_003728725.1 cag pathogenicity island protein L Virulence cag PAI Protein 2e-101 97
HP0539 BAD13872.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-101 97
HP0539 BAD13982.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-101 97
cag18 AAR03962.1 Cag18 Virulence cag PAI Protein 3e-101 97
HP0539 BAD14064.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-98 95
HP0539 BAD13845.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-99 95
cagL YP_005777280.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 95
HP0539 BAD14010.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 95
cagL YP_005779054.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-100 95
HP0539 BAD13955.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 95
HP0539 BAD13818.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 95
HP0539 BAD13791.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-100 95
cagL YP_005774532.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-99 95
HP0539 BAD13900.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-99 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC_02665 YP_003926821.1 cag pathogenicity island protein L VFG0298 Protein 1e-102 98