Gene Information

Name : HPPC_02640 (HPPC_02640)
Accession : YP_003926816.1
Strain : Helicobacter pylori PeCan4
Genome accession: NC_014555
Putative virulence/resistance : Virulence
Product : cag pathogenicity island protein (cagQ, cag14)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 521273 - 521578 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence : 
ATGGGAAAAATTTTAGCTTCTTTGTTGGGTAGCGGAACAAATCTTTTTACGGGTTTATCTAGTGATTTGTTTTCTATGAT
ATTAAATTTTTTGTTCTTTCTAATGTTAATGATGGGACTTAATGAAATATTAGAGAAGAAATTCAACTTACCCATGGATA
ATATCAAGAATTTTATGACGGAAGTGCTGAAGAATGGATTTGGTAGTATGAAAAACATGGGATCTGCTTTGATTGGCAAT
GGTTTTAGCAGTAGCAAATCAGACAAAACCGCTAATAAAATGGGTGCTCTCCAAGTAAAACTTTAG

Protein sequence : 
MGKILASLLGSGTNLFTGLSSDLFSMILNFLFFLMLMMGLNEILEKKFNLPMDNIKNFMTEVLKNGFGSMKNMGSALIGN
GFSSSKSDKTANKMGALQVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HP0535 BAD14006.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-25 97
HP0535 BAD13841.1 cag pathogenicity island protein Virulence cag PAI Protein 8e-26 97
HP0535 BAD14060.1 cag pathogenicity island protein Virulence cag PAI Protein 4e-25 96
HP0535 BAD13787.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-25 96
HP0535 BAD13951.1 cag pathogenicity island protein Virulence cag PAI Protein 2e-25 96
HP0535 BAD13896.1 cag pathogenicity island protein Virulence cag PAI Protein 6e-25 95
HP0535 BAD13978.1 cag pathogenicity island protein Virulence cag PAI Protein 3e-25 94
HP0535 BAD13814.1 cag pathogenicity island protein Virulence cag PAI Protein 5e-25 94
HP0535 BAD14033.1 cag pathogenicity island protein Virulence cag PAI Protein 9e-23 89
cagQ AAC44691.1 CagQ Virulence cag PAI Protein 9e-23 89
cag14 AAR03897.1 Cag14 Virulence cag PAI Protein 9e-23 89
cag14 AAR03958.1 Cag14 Virulence cag PAI Protein 9e-23 89
cag14 AAR03927.1 Cag14 Virulence cag PAI Protein 7e-23 88
cagQ NP_223201.1 cag island protein Virulence cag PAI Protein 1e-22 88
HP0535 NP_207331.1 cag pathogenicity island protein (cag14) Virulence cag PAI Protein 4e-23 88
cag14 AAR03869.1 Cag14 Virulence cag PAI Protein 2e-22 88
HP0535 BAD13868.1 cag pathogenicity island protein Virulence cag PAI Protein 1e-22 88
cagQ YP_003728730.1 cag pathogenicity island protein Q Virulence cag PAI Protein 5e-22 86
HP0535 BAD13923.1 cag pathogenicity island protein Virulence cag PAI Protein 7e-23 85

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HPPC_02640 YP_003926816.1 cag pathogenicity island protein (cagQ, cag14) VFG0294 Protein 1e-23 88