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Name : HPPC_02550 (HPPC_02550) Accession : YP_003926800.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG0790 EC number : - Position : 500451 - 501305 bp Length : 855 bp Strand : - Note : COG0790 FOG: TPR repeat, SEL1 subfamily DNA sequence : ATGTTTAAAGATTTTTATCGCACCACCCTCTCTTTTTTAAAGCCTTTATTGCTTTTACTAGTTTTATTGTTGCCGTTTTC GCTTTGTATAGCTGATGAATATATTAGCATCAGTGATGATTGGGATGAAAGGGCACGAAATCAATGGGATGAAATTGCGC GAAATCATAAGACATATTATTTTGAAAATGGTTTAGACCATTTTAATCAAGGCCAATACAAACAAGCCTCTAAAGATTTT AAATTGGCGCAAGAATACGGCATTGGGCTTGGCAACGTTTATTTAGCCAAAATGTATTTGGAGGGAAAGGGCGTGAAAGT GGATTACAAAAAAGCGCAATTCTATGCAGAAAACGCTATCAAAGGGTATGGGAGCGGGTTGTTAGGGGGCGCTCTTATTT TAGGACGCATGCAAGCGCAAGGCTTAGGGATGAAAAAGGATTTGAAACAAGCGCTCAAGACTTACAGGCATGTGGTTCGC ATATTTTCTAATAAAAGCACAAATTATTTTGCTAACAATTTTAGATTACCAAACCTTGCGTTCACTAGTATGCTTATTGG ATCGCGATTCATTGATCTTTCAGGTTTGAGCGCGAATCCTATAAAATTTGGAAAGAAATTTGGAATACTTGTTAAGAAAT CCACTCAAATCAAAGATAAGACACTTTCTTGGGAAGACATTGCTGAAATTTCAAGCAATATTATTTTACTCAAACAACAA ATGGGGGAGATCCTTTATAGGATTGGGATCGCTTATAAAGAAGGGCTTGGCACTAGAAAGAAAAAGGACAGGGCTAAAAA ATTCCTGCAAAAATCCGCAGAATTTGGCTATGAAAAAGCCATGGAAGCTCTATAG Protein sequence : MFKDFYRTTLSFLKPLLLLLVLLLPFSLCIADEYISISDDWDERARNQWDEIARNHKTYYFENGLDHFNQGQYKQASKDF KLAQEYGIGLGNVYLAKMYLEGKGVKVDYKKAQFYAENAIKGYGSGLLGGALILGRMQAQGLGMKKDLKQALKTYRHVVR IFSNKSTNYFANNFRLPNLAFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLSWEDIAEISSNIILLKQQ MGEILYRIGIAYKEGLGTRKKKDRAKKFLQKSAEFGYEKAMEAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPB8_726 | YP_003728747.1 | chitin synthase regulatory factor 3 | Not tested | cag PAI | Protein | 4e-104 | 93 |
