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Name : HPPC_02515 (HPPC_02515) Accession : YP_003926793.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Virulence Product : glutamine synthetase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0174 EC number : - Position : 492445 - 493890 bp Length : 1446 bp Strand : - Note : COG0174 Glutamine synthetase DNA sequence : ATGGTAGTAAGAACTCAAAATAGTGAAAGCAAGATCAAAGAATTTTTTGAATTTTGCAAAGAAAATGAAGTGGAATTTGT GGATTTTAGATTCAGCGATATTAAAGGCACTTGGAATCACATCGCTTATTCTTTTGGGGCTTTAACGCATGACATGTTTA AAGAAGGGATCCCTTTTGATGCAAGCTCTTTTAAAGGCTGGCAAGGCATTGAACACTCGGATATGATTTTAACTCCCGAT TTGGTGCGTTATTTCATTGACCCTTTTAGCGCAGATGTGAGCGCGGTCGTGTTTTGCGATGTGTATGATGTGTATAAAAA CCAGCCTTATGAAAAATGCCCTAGAAGTATCGCTAAAAAAGCCTTACAACATTTAAAAGATTCAGGTTTGGGCGATGTGG CTTATTTTGGCGCGGAGAATGAATTTTTTATCTTTGATTCCATTAAGATTAAAGACGCTTCCAATTCCCAATATTACGAA GTGGATAGCGAAGAGGGCGAATGGAATCGGGATAAAAGCTTTGAAAACGGCGTGAATTTTGGGCATAGACCGGGCAAGCA AGGGGGCTATTTGCCTGTGCCGCCAACGGATACGATGATGGATATTCGCACAGAAATCGTGAAAGTCTTAAACCAAGTGG GGCTAGAAACTTTTGTCGTCCATCATGAAGTCGCGCAAGCGCAAGGCGAAGTGGGCGTGAAATTTGGGGATTTAGTGGAA GCCGCTGACAATGTCCAAAAACTCAAATATGTGGTTAAAATGGTCGCTCATTTAAACGGGAAAACGGCTACTTTCATGCC AAAACCCCTATATGGGGATAATGGGAGCGGGATGCACACCCATGTGAGTATTTGGAAGAATAACGAAAACCTTTTTGGTG GCGAAACTTACAAGGGCTTGAGCGAGTTTGCGTTGCATTTTTTAGGGGGCGTGTTGCGCCACGCTAGAGGGTTAGCCGCT TTCACTAACGCTTCCACTAATTCTTACAAACGCCTGATTCCGGGATATGAAGCCCCATCCATTTTAACTTATTCAGCCAG CAATAGGAGCGCTAGCGTGCGTATCCCTTATGGGATTTCTAAAAACAGCGCTAGGTTTGAATTCAGGTTTCCTGACAGCT CATCAAACCCCTACCTAGCTTTTGGGGCTATTTTAATGGCGGGCATTGATGGCGTTAAAAATAAAATGGATCCCGGCGAA GCGATGGACATTAACCTTTTCAAGCTAACTTTAGACGAAATTAGAGAAAAGGGTATCAAACAAATGCCCCACACTTTAAG GAGATCATTAGAAGAAATGCTAGCCGATAAGCAGTATTTAAAAGAGGGTCAGGTCTTTAGCGAAGAATTTATCCAGGCCT ATCAGTCTCTTAAATTCCATTCTGAAGTGTTCCCATGGGAGAGCAAACCCCATCCCTTTGAATTTATCACCACTTATTCA TGCTAA Protein sequence : MVVRTQNSESKIKEFFEFCKENEVEFVDFRFSDIKGTWNHIAYSFGALTHDMFKEGIPFDASSFKGWQGIEHSDMILTPD LVRYFIDPFSADVSAVVFCDVYDVYKNQPYEKCPRSIAKKALQHLKDSGLGDVAYFGAENEFFIFDSIKIKDASNSQYYE VDSEEGEWNRDKSFENGVNFGHRPGKQGGYLPVPPTDTMMDIRTEIVKVLNQVGLETFVVHHEVAQAQGEVGVKFGDLVE AADNVQKLKYVVKMVAHLNGKTATFMPKPLYGDNGSGMHTHVSIWKNNENLFGGETYKGLSEFALHFLGGVLRHARGLAA FTNASTNSYKRLIPGYEAPSILTYSASNRSASVRIPYGISKNSARFEFRFPDSSSNPYLAFGAILMAGIDGVKNKMDPGE AMDINLFKLTLDEIREKGIKQMPHTLRRSLEEMLADKQYLKEGQVFSEEFIQAYQSLKFHSEVFPWESKPHPFEFITTYS C |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glnA | YP_003728749.1 | glutamine synthetase | Not tested | cag PAI | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HPPC_02515 | YP_003926793.1 | glutamine synthetase | VFG1399 | Protein | 2e-89 | 45 |
