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Name : HPPC_01820 (HPPC_01820) Accession : YP_003926657.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 360329 - 362254 bp Length : 1926 bp Strand : - Note : COG0021 Transketolase DNA sequence : ATGCGATTGAGTAACGCTGACTTAGAACGATTAAAAAGCATGGCCAACACGCTGCGCTTTTTGTGTGCGGACATGATAGA TAGGGCTAATAGCGGGCATCCGGGCGTGTGCTTGGGATTAGCCGATGTGATGGTGGTTTTAAGCTTGCACTTAAACCTAA ACCCCATTAACCCTAAATGGCTTAATAGGGACAGGCTGGTTTTTAGCGGAGGGCATGCGAGCGCGTTAGCGTATAGTTTG TTGCATTTGTGGGGCTTTGATTTGAGCTTGGAAGATTTAAAGCGTTTCAGGCAATTATACTCTAAAACCCCAGGACACCC CGAATTGCACCACACCGAAGGCATTGAGATCACAACTGGGCCTTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTAGATAAAGAAACCATTTCTCATAAAGTCTATTGCTTGTGTGGGGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGCGCTTCTTTAGCCGGGCACCTCAACCTGAACAATCTCATTGTGATTTATGACAG CAACCAGATCAGCATTGAAGGCGCTATCAATATTAGTTTTAGCGAACAGGTCAAGATGCGGTTTTTGGCGCAAAATTGGG AAGTGCTAGAATGCGATGGGCATGACTATCAAGCAATTCACAATGCTTTAGAAGAAGCCAAAAAATCCCATAAACCCACG CTTTTAATCGCTCATACGATTATTGGTAAGGGGGCTATTGGTTTAGAGGGGAGTGAAAAAACGCATGGCTCGCCTTTAAA TAAAGAAGTGTTAAAACAATCCAAAGAAAACGCTCAAATCAACCCTGATGAAAGCTTTATCATTGGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGCGTTAGCTTAGAAGCCTTATGGGAAAAGTCCTTAAGCCCTAAAACAAAAGAA AAGATCCATGCGTTAAAGAATTTTGATTTTAACGCCATCCATTACCCCACCTTTAAAAAAGGCGAATCTCTAGCCACGAG AGTGAGTAACGGCATGATTTTAAACGCTATCGCCAAAGAATGCGAGGGCTTTTTAGGAGGGAGCGCGGATTTAGCCCCAT CTAATAACACGCATTTGAAACACTCTGGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATCAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTGTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTACTT GATGCCTAGCATTCGTTTGAGTGCTTTAATGAAACTGAAAGCCCTTTTTATCTTTACGCATGACAGCATTGGCGTGGGCG AAGACGGGGCGACGCACCAACCCATAGAGCAATTGAGCCATTTACGCGCTTTGCCCAATTTCTATGCTTTCAGGCCTAGC GATGCTTTTGAAAATACGGCTTGCATGCAAATGGCGTTGAGTTTGAACGCTCCTAGCGCTTTTATTTTATCGCGCCAGAA TTTACCCGTGCTTGATGAGGTCTCTAAAGAGCAGGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA TCACGCTCGTTGCGAGCGGGAGCGAGGTCTCTTTGGCTTTAGAGAGCGCTAAAATTTTAGAGCGAGAAAATATCCCCACT CAGGTGGTGAGCGTGCCATGCTTTGATTTATTGATAGAGCAAGATGAAAGCTATCTTAAAGAACTCTTTAAGGGTAAAGT CTTAGTCATTGAAGCGAGCCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTGGCATGGATTCTTTTGGGAGCT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAACATCACCACTCAAGCGAAAAGGTTGCTCAAC GCATGA Protein sequence : MRLSNADLERLKSMANTLRFLCADMIDRANSGHPGVCLGLADVMVVLSLHLNLNPINPKWLNRDRLVFSGGHASALAYSL LHLWGFDLSLEDLKRFRQLYSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKETISHKVYCLCGDGD LQEGISYESASLAGHLNLNNLIVIYDSNQISIEGAINISFSEQVKMRFLAQNWEVLECDGHDYQAIHNALEEAKKSHKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENAQINPDESFIIGPKNKMHFEEVKVRGVSLEALWEKSLSPKTKE KIHALKNFDFNAIHYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSGDFPLGQNLHFGIREHAM GAITNALAAYGLFVPFCATFFVFSDYLMPSIRLSALMKLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQMALSLNAPSAFILSRQNLPVLDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKILERENIPT QVVSVPCFDLLIEQDESYLKELFKGKVLVIEASRAIEWYRFADKIIGMDSFGSSAKGDKLFEKFGFSVENITTQAKRLLN A |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 4e-95 | 41 |
