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Name : HPPC_07715 (HPPC_07715) Accession : YP_003927797.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Virulence Product : VirB10 type IV secretion protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG2948 EC number : - Position : 1547587 - 1548852 bp Length : 1266 bp Strand : + Note : COG2948 Type IV secretory pathway, VirB10 components DNA sequence : ATGGGCTTTTTTAGAGTAATTAGAAACGCACCGATTGTAAGTGTCTTTATTGTTTTGATGCTTATTTTTTGTGCATGGTT TTTCCTTTATGATGATAGCTCGCCTAAAGCAGTGAGAAATTATGTTAAAAGCAAGTTTCCAATCTCTGACTATCTCTACA AAAAAGCGGATAAAAAGAAGATCCCACCACAGAACAATGTCATTAAACAAGAGATTAAAGAAGAAGAAATTAAAAAATCT TGTAAGGGTCAGATAACAGATAATAAGGGTAATTTAATAGATGATGATTGCAATATTATAGCCACTCAAAAACAAGTTAA TAAATTACCAAACTTACCAAAAGATATACTTAAAACCAAACCTACCGTTGTCTCCAATCCTTTCAACTACAATACCGCTA ACGAAGATGAAAAATCCCGCCTTGTGATTTTAGCTTCTCGTATTAGCAGTCAAAAAGAAACGCAACCTCCCATTTCTATA AAAAATAGCGTTTCTCACATAAAATCCAAAGAAAAACGAGAGCTTGAAAAAGAATACGGATCTAGCGGGTTTAAAAATTT TAAAAGAAAAAATGTAGCGAGCAGTGAAAACAAACTTTTAAGAACGATTACAGCTGACAGAATGATCCCAGCCATTCTGA TCACTCCTATTAGTAGTGAAATAGGGGGGAGTAAGATAGTCGCTCAAGTGGAGAGCGATATATACGCAACGATGGGTAGA GCGGTTTTAATCCCTAAAGGGAGTAGAGCCATAGGCTATTACAACTCTAATAATAAAATAGGAGAATACCGCTTAGAAAT TGCTTGGAACAGGATCATCACGCCACAAGGGGTCAATATCATACTAAGCGATGCTAAGGGAGCTGATGTCAAGGGCTATA ACGGCATGATAGGCACACTCCATAACAAATATTGGGAACGCTATGGTATCCCCTTATCCTTAAGCACCTTGTCAAATGGG CTACTCATAGGTCTTACTAGCGGTCTTACCGAAGCGATGAAAAACAAAAGGGGTGGTTTTAACCAAAACTATTTTGGAGA TTACATGATGATGCAAATGACGAGACAAACTGGTATCAGCCTAAATAATATTATCGCTCAAATCATGCGAGAGCAAATCA GGATTAAGCCCATTATCACTATTAGAGAAGGAAGCCATATCTTTATTAGTCCTAATACGGATATTTGGTTTCCTATCCCT AAAAACAATGAAGTCTTAGCGAAATTTTTTAATGAAGAAAAGGAGCAAAACAATGATACAAAATAG Protein sequence : MGFFRVIRNAPIVSVFIVLMLIFCAWFFLYDDSSPKAVRNYVKSKFPISDYLYKKADKKKIPPQNNVIKQEIKEEEIKKS CKGQITDNKGNLIDDDCNIIATQKQVNKLPNLPKDILKTKPTVVSNPFNYNTANEDEKSRLVILASRISSQKETQPPISI KNSVSHIKSKEKRELEKEYGSSGFKNFKRKNVASSENKLLRTITADRMIPAILITPISSEIGGSKIVAQVESDIYATMGR AVLIPKGSRAIGYYNSNNKIGEYRLEIAWNRIITPQGVNIILSDAKGADVKGYNGMIGTLHNKYWERYGIPLSLSTLSNG LLIGLTSGLTEAMKNKRGGFNQNYFGDYMMMQMTRQTGISLNNIIAQIMREQIRIKPIITIREGSHIFISPNTDIWFPIP KNNEVLAKFFNEEKEQNNDTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB10-1 | YP_002301098.1 | VirB10 type IV secretion protein | Virulence | cag PAI | Protein | 0.0 | 95 |
