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Name : HPPC_07655 (HPPC_07655) Accession : YP_003927785.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : integrase/recombinase (xerD) Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1534128 - 1535195 bp Length : 1068 bp Strand : + Note : COG0582 Integrase DNA sequence : ATGCTAAATAACAAACTCACCAAATCTCAAAGAGAACTCTTTGATAATCTTAAAGCCTTTTTATACACTAAGGTTAAAAA TTTCACTCCTATTCAAGATGTGAATGATATGGCTTTGATATTAGATACGCAAAACAAAGTTTTAAAATGCCATGATGTTG AGCAATTAAGACAACTCTGTCATATTCTTTATAATCAAGGTATCAAACACACCATAATGATGCAAGGCTTGTTTTTATTC TTTGAATACTTTAGAGACAATCTGAAACTAAGAAGTTTTAGAATGCTTAGTGAAGAGCAAGTCATTAACTTTCTTTTTGA ACTCGCTCAAAATAGAAAACCAAGCTCTATGGCTAAGTATGTGATGTATTTAAGGCAATTCTTTGATTACTTGGATAGAA AAAAGCATTATAACTTTGACTTTGCCCTTAAAAACCTAGCCTTTGCTAAGACCAAAGAAAGCTTACCCAGACATTTAAAC TACAAGGATTTAAAGAGTTTTTTAAAAACACTTTTAGAATATAAGCCAACCACTAGCTTTGAAAAGCGCAATAAGTGTGT TTTACTCATTGTAATGCTAGGAGGGCTTAGAAAATGCGAAGTGTTAAACATAGAGTTAAAACACATTCAAGTAGAAGAAC AAAACTACTCTATTTTAATTCAAGGTAAAGGTAGGAAAGAAAGAAAAGCTTATATCAAAAAGAGTTTGTTAGAACCAAGC TTGAATGCTTGGCTTAGTGATGATTACAGACTAAAATATTTCAATGGAGCATATCTCTTTAAAAAGGATAAGCAAAAATC ACAAAATTCTTTAACGCTTTATAATTTTATCCCCTTAATCTTTAAATTAGCCCAAATCAAACATTACAAACAATATGGCA CAGGCTTACATCTATTTAGACATAGTTTTGCTACGCTTATCTATCAAGAGACCCAAGACTTAGTTTTAACTTCAAGAGCT TTAGGGCATAGCTCATTACTCTCTACTAAGATTGATATCCATACCACACAAGAGTATAACAAGAAAGTAGCTCTTGTATT TGATAGTTTGATAGAGAATAAGAAGTAA Protein sequence : MLNNKLTKSQRELFDNLKAFLYTKVKNFTPIQDVNDMALILDTQNKVLKCHDVEQLRQLCHILYNQGIKHTIMMQGLFLF FEYFRDNLKLRSFRMLSEEQVINFLFELAQNRKPSSMAKYVMYLRQFFDYLDRKKHYNFDFALKNLAFAKTKESLPRHLN YKDLKSFLKTLLEYKPTTSFEKRNKCVLLIVMLGGLRKCEVLNIELKHIQVEEQNYSILIQGKGRKERKAYIKKSLLEPS LNAWLSDDYRLKYFNGAYLFKKDKQKSQNSLTLYNFIPLIFKLAQIKHYKQYGTGLHLFRHSFATLIYQETQDLVLTSRA LGHSSLLSTKIDIHTTQEYNKKVALVFDSLIENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HPP12_0437 | YP_002301073.1 | integrase/recombinase XercD family | Not tested | cag PAI | Protein | 2e-98 | 63 |
