|
Name : HPPC_05765 (HPPC_05765) Accession : YP_003927413.1 Strain : Helicobacter pylori PeCan4 Genome accession: NC_014555 Putative virulence/resistance : Unknown Product : pyrimidine nucleoside transport protein (nupC) Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG1972 EC number : - Position : 1171740 - 1172996 bp Length : 1257 bp Strand : - Note : COG1972 Nucleoside permease DNA sequence : ATGATTTTTAGCTCTCTTTTAAGTGTTGTAGGGATGGCGGTGCTTTTTCTTATTGCTTGGGTGTTTTCTAGCAATAAAAG GGCTATTAATTATCGCACGATTATCAGCGCCTTTGTGATCCAGGTGGCTTTAGGGGCGTTGGCTTTATATGTGCCTTTGG GTAGGGAAATGCTGCAAGGTTTAGCCAGTGGCATACAAAGCGTGATCGGTTACGGCTATGAAGGGGTGCGTTTCTTATTT GGGAGTCTCGCTCCAAACGCTAAGGGCGATCAAGGGATAGGAGGCTTTATCTTTGCTATTAATGTTTTAGCGATCATTAT CTTTTTTGCTAGTTTGATTTCACTCCTATACTATTTAAAAATCATGCCTTTAGTGATCAATCTCATCGGTGGGGCGTTGC AAAAATGCTTAGGCACTTCTAAAGCAGAAAGCATGAGCGCAGCGGCTAATATTTTTGTAGCGCACACAGAAGCGCCCTTA GTCATTAAACCTTATTTGAAAAGCATGAGCGATTCAGAGATTTTTGCGGTCATGTGCGTGGGCATGGCTAGCGTTGCGGG GCCTGTGTTAGCCGGGTATGCGAGCATGGGTATTCCTTTGCCTTATTTAATAGCCGCTTCGTTTATGTCCGCTCCTGGGG GTTTGTTGTTCGCTAAAATCATTTACCCGCAAAACGAAACCATTTCCAGCCATGCAGATGCTTCTGTAGAAAAGCATGTC AATGCCATAGAAGCGATCGCTAATGGGGCAAGCACAGGGCTAAATTTAGCTTTGCATGTGGGAGCGATGCTTTTAGCCTT TGTGGGGATGCTTGCGCTCATTAATGGGCTTTTAGGGGTTGTAGGGGGATTTTTAGGCATGGAGCATTTGTCTTTAGGGT TGATTTTAGGCACGCTCTTAAAACCCTTAGCTTTTATGCTAGGCATTCCTTGGAGTCAGGCCGGGATTGCTGGAGAAATC ATAGGCATTAAAATCGCGCTCAATGAATTTGTGGGCTATATGCAATTTTTACCTTATTTGGGCGATAACCCTCCTCTAAT CTTGAGCGAGAAAACTAAAGCGATCATCACTTTTGCGTTGTGTGGGTTTGCTAACTTAAGCTCAGTCGCTATGCTTATTG GGGGGCTTGGCAGTTTAGTGCCTAAAAAGAAAGATCTCATTGTAAGGCTTGCTTTAAAAGCGGTGCTTGTAGGCACGCTT TCTAATTTCATGAGCGCGACTATCGCCGGGTTATTCATAGGGCTAAACGCTCACTAA Protein sequence : MIFSSLLSVVGMAVLFLIAWVFSSNKRAINYRTIISAFVIQVALGALALYVPLGREMLQGLASGIQSVIGYGYEGVRFLF GSLAPNAKGDQGIGGFIFAINVLAIIIFFASLISLLYYLKIMPLVINLIGGALQKCLGTSKAESMSAAANIFVAHTEAPL VIKPYLKSMSDSEIFAVMCVGMASVAGPVLAGYASMGIPLPYLIAASFMSAPGGLLFAKIIYPQNETISSHADASVEKHV NAIEAIANGASTGLNLALHVGAMLLAFVGMLALINGLLGVVGGFLGMEHLSLGLILGTLLKPLAFMLGIPWSQAGIAGEI IGIKIALNEFVGYMQFLPYLGDNPPLILSEKTKAIITFALCGFANLSSVAMLIGGLGSLVPKKKDLIVRLALKAVLVGTL SNFMSATIAGLFIGLNAH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yutK | YP_005163383.1 | putative sodium/nucleoside cotransporter | Not tested | Not named | Protein | 3e-49 | 41 |
