Gene Information

Name : mtsB (LPST_C0879)
Accession : YP_003924193.1
Strain : Lactobacillus plantarum ST-III
Genome accession: NC_014554
Putative virulence/resistance : Virulence
Product : manganese ABC transporter, permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 950190 - 951065 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGATGCAATCAATTACGACCTTTATGGCTGCTTTGGGGAAGTATGATTTCTTACAAAGTGCGCTAATTACGGCTATTAT
GGTCGGGGTCATGTCAGGAATTATTGGTAGCTTTATTATTTTACGAGGCATGTCGATGATGGGCGATGCCATCTCGCATG
CCGTTTTACCTGGTGTTGCGGTAGCTTATATGCTCGGTATCAACGTCCTAATTGGTGCTTCGGTTTTTGGAATTCTAGCC
GCTAGCTTGATCGGATTCGTTGCGAGCCGTAGTAAGATTAAGACTGACACCTCAATTGGGATTGTCTTCAGTGCGTTTTA
CGCACTCGGTTTTATCCTAATTTCATTAGCTGAAAGTTCGACGAACTTGCACCACATCTTATTCGGTAACATTCTCGCTG
TGAGTGATACTGATATGATGACGACGACGGTCGTGTTAGGACTAGTGATTTTATTCGTGGTCTTCTTCTACAAGGAATTA
CTGATTACGTCATTTGATCCGACCTTTGCGAAGACTTATGGTCTCAAGGTCCAACTGTTACATTACGCGTTAATGCTGGT
CTTAACGCTAGTGACCGTTTCAGCGCTACAAACCGTCGGGATCATTTTAGTGGTCGCGATGTTGATTACACCGGCTGCGA
CGGCCTTTCTATGGACAGAACGACTGGCAGTCATGCTTGGACTGTCAGCCTTAATTGGGGTCTTGTCCTCAGTGGTGGGC
TTATATCTCAGCTACACGTTGAACTGGGCTTCTGGTCCGGCCATCGTGCTAGTAGCGGCTATTTTCTTCGGTATTTCTTT
CATCATCTCACCTAAGCAGGCCTTGTTGCCGACGCTTTGGAAAGGGCAAGCAGCAGCGCGACGGGTGACAGCATGA

Protein sequence :
MMQSITTFMAALGKYDFLQSALITAIMVGVMSGIIGSFIILRGMSMMGDAISHAVLPGVAVAYMLGINVLIGASVFGILA
ASLIGFVASRSKIKTDTSIGIVFSAFYALGFILISLAESSTNLHHILFGNILAVSDTDMMTTTVVLGLVILFVVFFYKEL
LITSFDPTFAKTYGLKVQLLHYALMLVLTLVTVSALQTVGIILVVAMLITPAATAFLWTERLAVMLGLSALIGVLSSVVG
LYLSYTLNWASGPAIVLVAAIFFGISFIISPKQALLPTLWKGQAAARRVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 5e-60 60
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 7e-60 60
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-39 42
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-39 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-39 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-39 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 8e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_003924193.1 manganese ABC transporter, permease BAC0442 Protein 5e-42 43
mtsB YP_003924193.1 manganese ABC transporter, permease BAC0352 Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mtsB YP_003924193.1 manganese ABC transporter, permease VFG0528 Protein 5e-40 42