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Name : serS1 (LPST_C0408) Accession : YP_003923725.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : - Position : 425219 - 426490 bp Length : 1272 bp Strand : + Note : - DNA sequence : ATGTTAAATCCAAAGTTTGTTCGTAATAACTCAGAACTTGTTAAGGCTAAGCTCCAGACACGGAAAGTCGATCCGGCTGA GGTTGATGAATACTTACAGTTAGACCAACAAAATCGGGATGCAATTACTAAGGTTGAAGGCTTGAAGAAACAGAAAAACC AGTTGACAGAGCAAATTGGGCAAAGTGATCCGCAATCGGAAGCGGGTCAAGCCCTCATTCAACAAGTCAAACAGCTGAAC GGTGATATTAAGAGTACGGAAGCGGCCCAAACGGAAGTAAACGATCGGCTTCATTACTTAGCGATTCGCTTCCCGAACTT ACCTGCTGATGATGTACCAGTCGGTCCTGACGAAGATAGCAACGTTGAGATGCGTAAGCACGGTGATATTCCAACGTTTG AGTTTAAACCTAAGGCGCACTGGGAATTGGGTGAGAGCTTAGGAATCTTGGATTTTGACCGGGCAGCAAAAGTCGCGGGC GCGCGCTTTGTTTATTATAAGGATGCGGGTGCACTCTTAGAACGGGCGGTTTACAGCTTTATGCTAGATCTGCACATACA AAAGCAAGGGTACCATGAAATTATTCCGCCATACTTGGTGAACGCTCAGACAATGTATGGAACTGGGCAATTTCCGAAGT TCAAAGAAGACGTCTACACGGTTGAATCTTCAGGAATGACGTTGATCCCGACGGCTGAAGTACCGCTGACCAATTACTAT GCGAATGAAATCTTATCTGAAGATCAATTGCCAACGTACTTCACGGCGATGACGCCTTGTTATCGCTCCGAAGCTGGGAG TGCGGGGCGTGATACCCGGGGCTTGATTCGTATGCACCAATTTCACAAAGTCGAGATGGTCAAGTACTGTAAACCTGAGA ATTCATACGATGAGCTCGAAAAATTAACGGATAATGCCGAAGAAGTGTTGCGCGAATTAGGGCTTGCATACCATGTTATT AAGCTTTCAACGGGGGATACTGGTTTCTCATCAGCCAAGACCTACGATGTGGAAGTATGGATGCCAGAACAAGGCGTTTA TCGGGAAATCAGTTCATGCTCTAACTGCTTGGACTTCCAAGCACGGCGGGCGATGATTCGTTACCGGAAAGCTGATGGGA CGGTCGATTACGTCCACACGTTGAATGGTTCTGGACTTGCTGTTGGCCGGACGGTAGCTGCGATTTTGGAAAATTATCAA CAAGCCGATGGCACGGTTAAGATTCCTAAGGTGCTCCAACCTTACATGCATGGTATGACAGAGATAAAATAA Protein sequence : MLNPKFVRNNSELVKAKLQTRKVDPAEVDEYLQLDQQNRDAITKVEGLKKQKNQLTEQIGQSDPQSEAGQALIQQVKQLN GDIKSTEAAQTEVNDRLHYLAIRFPNLPADDVPVGPDEDSNVEMRKHGDIPTFEFKPKAHWELGESLGILDFDRAAKVAG ARFVYYKDAGALLERAVYSFMLDLHIQKQGYHEIIPPYLVNAQTMYGTGQFPKFKEDVYTVESSGMTLIPTAEVPLTNYY ANEILSEDQLPTYFTAMTPCYRSEAGSAGRDTRGLIRMHQFHKVEMVKYCKPENSYDELEKLTDNAEEVLRELGLAYHVI KLSTGDTGFSSAKTYDVEVWMPEQGVYREISSCSNCLDFQARRAMIRYRKADGTVDYVHTLNGSGLAVGRTVAAILENYQ QADGTVKIPKVLQPYMHGMTEIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-128 | 59 |
