Name : choQ (LPST_C0310) Accession : YP_003923628.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Unknown Product : glycine betaine/carnitine/choline ABC transporter, ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 331046 - 332017 bp Length : 972 bp Strand : + Note : - DNA sequence : ATGACAACGGCAATTGAATTTCAACACGTCCAGAAAGACTTTAATGGGCAGACCGTGATTCCCGACCTTAATTTAACGAT TGACCAGGGTGAGCTATTTGTTTTGGTAGGGACTTCTGGGAGTGGCAAAACGACGTCACTTAAAATGATCAACTGCTTAG AGCCACTGACGGCTGGTAAAATTCTAGTTAATGGTACTGATACAACCACGATACCAGTCCGAAGTCTACGGTGGCAAATG GGGTATGTCTTACAGCAAATTGCCTTGTTCCCAACGATGACGGTGGCGCAAAATATCGCCGTGATTCCGGAAATGAAAGG GACAGCTAAGAAGGAAATTAATCAAACGATTGATGAGCTATTGGCGGAAGTTGGCCTCGATCCAAAGGAATACCGTGACC GGATGCCGTCAGAATTATCCGGTGGTGAGCAGCAACGCATCGGTATCTTACGGGCGATTGCGGCGCAACCAGATATTGTT TTGATGGATGAACCATTTAGTGCGTTAGACCCCATCTCGCGGCAACAATTGCAAGACTTGGTCTTACGGCTACACGCCCG CTATCACAACACGATCGTCTTCGTGACGCATGATATGAATGAGGCGTTGAAGTTGGGTGACCGGATCGGTGTCATGCAAC ACGGTCAGTTAATACAAGTCGATACGCCGGCTGCTCTGGCTCAGCATCCAGTGAACGACTTTGTGCGGAACTTCTTTGGT GCGAGCCGAGCTAAAAATGTCTATGATGTCTACGTTGGGCGTGTAGGGCTTATTCAGGGTTATCTCACAGAAGAACCCAG TGTTGCGAGTGGTCGGATTCAATCGTTAGACGTTCAAGCCACGTTACGCACCGCCTTTACGGCATTGACAGATCACGATT ATGTGGCGGTCACGGAAGAAAATCGGGTTGTTGGCTATTTGGATCGCCAACGAATCGTGGCTTACTTGAGTCAACATGAA GAAGTATCTTAA Protein sequence : MTTAIEFQHVQKDFNGQTVIPDLNLTIDQGELFVLVGTSGSGKTTSLKMINCLEPLTAGKILVNGTDTTTIPVRSLRWQM GYVLQQIALFPTMTVAQNIAVIPEMKGTAKKEINQTIDELLAEVGLDPKEYRDRMPSELSGGEQQRIGILRAIAAQPDIV LMDEPFSALDPISRQQLQDLVLRLHARYHNTIVFVTHDMNEALKLGDRIGVMQHGQLIQVDTPAALAQHPVNDFVRNFFG ASRAKNVYDVYVGRVGLIQGYLTEEPSVASGRIQSLDVQATLRTAFTALTDHDYVAVTEENRVVGYLDRQRIVAYLSQHE EVS |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 9e-47 | 46 |
opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 1e-46 | 46 |