Gene Information

Name : LPST_C2317 (LPST_C2317)
Accession : YP_003925626.1
Strain : Lactobacillus plantarum ST-III
Genome accession: NC_014554
Putative virulence/resistance : Resistance
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2484097 - 2484777 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTCAACCAGTTTTAGCCTTACAAAATATTAATAAACAATTTGGTCACGGTCATACCGCTGTTAACGCTTTGACTGA
TGCCAATTTCGAAGTCAGTGCTGGCCAATTCGTCGCGATTATCGGCCCCTCTGGCTCGGGTAAATCCACCTTTTTGACGA
TTGCTGCCGGTTTACAAACGCCAACAAGTGGTCAAGTTATTCTGAACGGACAACCACTATCGAATCAAACGGAAAAACAG
CGCTTAGCCTACCGTTTCAATGAAATTGGCTTTATCTTGCAGAGTTCCAATCTGATTCCATTCCTGACGGTTCGTGAACA
GTTCAAGCTCGTCGATAAAATGGCCCGGCGCAAATTTGATCAAGCAGGCACCGATGAATTACTAGCAGAGTTAGCCCTTA
CTGAAGTTCGGGATGCCTACCCAAGTGACCTCTCCGGTGGTGAACGCCAACGTGTTGCCATCGCCCGTGCTCTTTACAAT
GATCCAAGCGTCATTCTCGCAGATGAACCGACCGCCAGCCTGGACACGCCCCGCTCCATCGACGTCGTCAAGCGCCTCGC
CAACGAAGCTCATCAGCACCAAAAGGCCATCGTAATGGTGACCCATGACCAACGGCTGATTGATGACTGTGACGTGGTCT
ATCAAATTGAAGATGGTAAGATGAGTCGCCGCGACTCGTAG

Protein sequence : 
MSQPVLALQNINKQFGHGHTAVNALTDANFEVSAGQFVAIIGPSGSGKSTFLTIAAGLQTPTSGQVILNGQPLSNQTEKQ
RLAYRFNEIGFILQSSNLIPFLTVREQFKLVDKMARRKFDQAGTDELLAELALTEVRDAYPSDLSGGERQRVAIARALYN
DPSVILADEPTASLDTPRSIDVVKRLANEAHQHQKAIVMVTHDQRLIDDCDVVYQIEDGKMSRRDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SARLGA251_00480 YP_005754062.1 ABC-type transport system ATPase Not tested Type-XI SCCmec Protein 4e-40 46
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 1e-45 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LPST_C2317 YP_003925626.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 2e-32 42
LPST_C2317 YP_003925626.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 3e-27 42