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Name : treC (LPST_C1936) Accession : YP_003925246.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Unknown Product : oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase) Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 2082180 - 2083595 bp Length : 1416 bp Strand : - Note : - DNA sequence : ATGCGATTAATTTTGGATTTAGTCGTCAATCACACATCAAGTGAACATCCGTGGTTCAAGGCGGCTAAGCAAAGTACAAG CAATCAATATCATGATTATTACATTTGGAAAGATGGGAGTAAAGAACAGTTGCCTAACAACTGGGGTTCCTCATTTGGCG GCTCAGCTTGGGAATATGTTGATCAACTCGGTCAATACTATTTACATTTGTTTGCAAAGCAACAGCCTGATTTAAATTGG GAAAACCCTAAAGTACGTCAGGATGTATATGAAATTATGCGTTTTTGGTTGAACAAAGGCGTTGATGGTTTTCGGATGGA TGTCATCAGTCTGTTGTCGAAAAAACCAACTTATCCGGATGGTCCGGTCATTCAAAATAAAGCGTATGGCAGTTATTATT ATGGTGCAGCCAATGGGCCTAAAATCCATGATTATTTACGTGAGATGAATCAGCAAGTATTAAGTCATTATGACATTATG ACTGTTGGCGAGACACCCCATACTAGTGTTGCTGAGGCTGAAAAATATACGGATGAACGACGTAAAGAATTAAACATGGT TTTCCACTTTGACCATATGCATTTAGATTATGATGAAAATGGTAAGTTTTCTACGAGACGCTTCAAATTATCCGCACTAA AACAAGTGTTTAATAAGTGGCAATTAGGCATGGCTGAACATCATGGCTGGAATAGCTTGTATTGGAGCAATCATGATCAA GCACGTCCGGTAACTCGGTTTGGTGTCGATGATACTGAGTACCGAGTTAAATCTGCGAAGCTGTTGGCGACTGTGTTACA TTTTCAACAAGGAACACCGTTTATTTATCAAGGTGAAGAACTAGGAATGACAAATGCCAAGTTCACCTCAATTGATGACT ATCAAGATATTGAAACACATAATATCTATCAAGACTTTATTAATCATAAACATCTCAGCAAAGAGTACACAATGAAGGCC ATTTATTTGAAGTCACGGGATAATGCGCGGACCCCGATGCAGTGGACCAGCAAACATAATGCCGGTTTTACAACGGGAAC GCCATGGCTTAGCGTCAATCCTAACTATACTAGAATTAATGTGGAACAAGCGTTAAAGGATAAAGACTCAATTTTCTATT ATTATCAGCAACTGATCAAGTTGCGCCATTCTTTATCGATTGTGACAACGGGTGACTTTGAGTTGCTTGATCCCGACAAT GAACAAGTATTTTCATACTTAAGACGAGATCAGAAGCAGATACTATTAGTCGCCGGGAATTTTACCGAAAAACCCCAAAA AATTGTTTTGCCAACAGAACTGCAGAATAGACCATGTGAGAAGATCATTAGTAATGATCAAAACATTGCAGAAGAGACTA ACAGTGTTGTTTTACCAGCATATGGTGCTGTTGCTTATTTGTTCAGTATTGATTAA Protein sequence : MRLILDLVVNHTSSEHPWFKAAKQSTSNQYHDYYIWKDGSKEQLPNNWGSSFGGSAWEYVDQLGQYYLHLFAKQQPDLNW ENPKVRQDVYEIMRFWLNKGVDGFRMDVISLLSKKPTYPDGPVIQNKAYGSYYYGAANGPKIHDYLREMNQQVLSHYDIM TVGETPHTSVAEAEKYTDERRKELNMVFHFDHMHLDYDENGKFSTRRFKLSALKQVFNKWQLGMAEHHGWNSLYWSNHDQ ARPVTRFGVDDTEYRVKSAKLLATVLHFQQGTPFIYQGEELGMTNAKFTSIDDYQDIETHNIYQDFINHKHLSKEYTMKA IYLKSRDNARTPMQWTSKHNAGFTTGTPWLSVNPNYTRINVEQALKDKDSIFYYYQQLIKLRHSLSIVTTGDFELLDPDN EQVFSYLRRDQKQILLVAGNFTEKPQKIVLPTELQNRPCEKIISNDQNIAEETNSVVLPAYGAVAYLFSID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-110 | 50 |
