|
Name : LPST_C1401 (LPST_C1401) Accession : YP_003924712.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Unknown Product : ABC transporter, ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 1523117 - 1524070 bp Length : 954 bp Strand : - Note : - DNA sequence : GTGGTTGCCATTAAGCTACACGAATTATCCAAAAGTTTTCAAGGTCCGGTAATCAATCAACTCAGTCTGACGATTCCTGA TCAACAAATCACGGCATTAATTGGCCCGTCCGGTTCCGGCAAATCAACGCTGTTAAACATGATTGCGGGCCTCACGACAC CTGACAGTGGTCAAATTTCATTTGATAATCAGCCCATTTTTGACGCCGCGACCCATTGGAATCAGCCCCCTGCCCAACGG CACTTGGCGATGGTTTTTCAAGACTTTGCCCTGTGGCCGCACATGACGGTCCAAGAAAATGTCGCTTTCGCTTTAGAAAA GCACCTGACCAAGCCAGAATTGACTGCTCAAGTCAACTGGGCCCTCGAACAAGTTAGTCTGATTGACTTCCGACATCGTT ATCCACGTGAACTTTCGGGCGGGCAACAGCAACGGGTCGCCCTTGCACGGGCACTAGCGACCCAACCGGATTTGATTTTA TTCGACGAAGCTTTAAGTGCGCTTGACCCCGAACTGCGCACACGGCTTCAATTAGAAATTCGCGCCCTGATTCACGACCA GCATCTGACGGCCATCTTTGTAACTCACGACCGTCCAGAAGCCTTGCAAGTTGCCGACCACCTCGTATTACTGAAAGGGG GCAACGTGGTGCAGACGGGCACACCAGCACAGCTGTACCAACAGCCAAAATCGCAATTTGTCGCCAATTTTATGGGCACC CTTAATCAGATCAACGCGTACCAGGCCATTCGCCCGGAATATGTCGCAGTCAGTCAAACGGGTACTCAGCAGCCCACTTA CCAAGGCTTGGTGCAGCGTTCAACCTTTATGGGCGATCATTTTGATACTTGCGTTCAAGTCGGCGCCTATGATTGGCACG TCAAGACCCAGCTACCCTATACCACTGCACCGATCACATTAAGCATCGATCCACATCAAATACTAACTTTTTAG Protein sequence : MVAIKLHELSKSFQGPVINQLSLTIPDQQITALIGPSGSGKSTLLNMIAGLTTPDSGQISFDNQPIFDAATHWNQPPAQR HLAMVFQDFALWPHMTVQENVAFALEKHLTKPELTAQVNWALEQVSLIDFRHRYPRELSGGQQQRVALARALATQPDLIL FDEALSALDPELRTRLQLEIRALIHDQHLTAIFVTHDRPEALQVADHLVLLKGGNVVQTGTPAQLYQQPKSQFVANFMGT LNQINAYQAIRPEYVAVSQTGTQQPTYQGLVQRSTFMGDHFDTCVQVGAYDWHVKTQLPYTTAPITLSIDPHQILTF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 6e-28 | 41 |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-27 | 41 |
