|
Name : LPST_C1143 (LPST_C1143) Accession : YP_003924456.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Virulence Product : response regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 1264721 - 1265248 bp Length : 528 bp Strand : - Note : - DNA sequence : ATGCTACCAAAAATGGATGGTTTAGAAGTGCTTCGGCGCATACGTAAACACGATACAATTCCAGTCATTATGATGACTGC CCGTGATTACGTCAGCGATAAAGTTGCCGGTTTGGACGGTGGTGCCGATGATTACATTACAAAGCCTTTTGATACTGAAG AATTGCTTGCCCGAGTACGCGTTATTTTACGGCACGCTGACCAACAACAAAACTTACAAGCAGTGTACAAATTTGCCGAT TTAGAGTTAAATACTAAATCTCGCCAAGTTAAACGTAACCATCATCTCGTTCAACTCACTCAGCGTGAATATGAGCTCTT ATTAACGCTAATGAAAAATGCACCCATCACTTTTACCCGTGATGAATTGTTAGACCAAGTTTGGGGCGTTGATTTTGAGG GTCAACCAAATATCGTTGATGTCTACATTCGCTATCTACGTCATAAAATCGATACGGATACCCAGCGAAAATTGATTCAT ACCGTCCGCGGAGTTGGCTACTGCCTGCGAGATGATACTCATGCGTAA Protein sequence : MLPKMDGLEVLRRIRKHDTIPVIMMTARDYVSDKVAGLDGGADDYITKPFDTEELLARVRVILRHADQQQNLQAVYKFAD LELNTKSRQVKRNHHLVQLTQREYELLLTLMKNAPITFTRDELLDQVWGVDFEGQPNIVDVYIRYLRHKIDTDTQRKLIH TVRGVGYCLRDDTHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 6e-30 | 44 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 3e-23 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LPST_C1143 | YP_003924456.1 | response regulator | HE999704.1.gene1528. | Protein | 3e-36 | 52 |
| LPST_C1143 | YP_003924456.1 | response regulator | AE015929.1.gene1106. | Protein | 2e-29 | 48 |
| LPST_C1143 | YP_003924456.1 | response regulator | BAC0197 | Protein | 1e-34 | 48 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_007793.3914065.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_002758.1121390.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_010079.5776364.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_002952.2859858.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_007622.3794948.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_003923.1003417.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_013450.8614146.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_002951.3238224.p0 | Protein | 3e-33 | 46 |
| LPST_C1143 | YP_003924456.1 | response regulator | BAC0125 | Protein | 7e-31 | 45 |
| LPST_C1143 | YP_003924456.1 | response regulator | BAC0308 | Protein | 4e-28 | 44 |
| LPST_C1143 | YP_003924456.1 | response regulator | HE999704.1.gene2815. | Protein | 3e-29 | 43 |
| LPST_C1143 | YP_003924456.1 | response regulator | BAC0638 | Protein | 3e-26 | 43 |
| LPST_C1143 | YP_003924456.1 | response regulator | BAC0083 | Protein | 4e-31 | 42 |
| LPST_C1143 | YP_003924456.1 | response regulator | AE000516.2.gene3505. | Protein | 8e-26 | 42 |
| LPST_C1143 | YP_003924456.1 | response regulator | NC_012469.1.7685629. | Protein | 7e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG1390 | Protein | 2e-40 | 47 |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG1386 | Protein | 4e-34 | 45 |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG0596 | Protein | 2e-30 | 44 |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG0473 | Protein | 1e-21 | 41 |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG1389 | Protein | 3e-33 | 41 |
| LPST_C1143 | YP_003924456.1 | response regulator | VFG1702 | Protein | 9e-24 | 41 |
