|
Name : clpE (LPST_C1031) Accession : YP_003924344.1 Strain : Lactobacillus plantarum ST-III Genome accession: NC_014554 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1116943 - 1119162 bp Length : 2220 bp Strand : - Note : - DNA sequence : ATGCTTTGTGACAATTGCCATAAGAACGAAGCGACGATCCATTTATATACGAGCGTCAACGGTCAGCGGCGACAAATCAA CCTTTGTCAAAATTGCTATCAACTGCTAAAGAATCAGGAACAGCAACCAAATAACGGAGTTGGAGGTGCTGATATGGCAC AAGATCCATTCGGTTTTGGTGGTCTTGACGACATTTTCCGTGCAATGCAGGGTGGCGTTGATCCTAATAACGCTTACCGG CAACAACAGACCCCACCGACCCAGCCAGCTGGTCCTAATGGCGGCAATCGTCGTGGCAATAACAACGGCGGTGGCCTCCT TGGCCAATACGGCTTCAACTTAACAGCACAAGCTAAACAGGGCAAAATCGATCCAGTGATTGGTCGCGATACCGAAATTA ATCGGGTTATCGAGATTTTGAATCGCCGGACCAAGAATAACCCCGTTTTAATTGGTGAAGCTGGGGTTGGTAAAACGGCG GTCGTGGAAGGACTAGCACAGAAAATCGTTTCTGGTCAAGTTCCACAAAAACTGTTAGATAAAGAAATTATTCGTTTGGA CGTGGCTTCCCTTGTTCAAGGTACCGGTATTCGAGGTCAATTTGAACAACGAATGCAACAATTAATGAAGGAAGTTCAAA GCAATCCGAATATCATCCTCTTCATTGACGAAATCCATGAAATCATGGGTGCCGGTAATGCTGAAGGTGGTATGGATGCT GGGAACGTCCTGAAACCCGCCCTTGCCCGTGGTGATTTCCAATTAGTTGGGGCCACGACATTAAACGAATACCGCGACAT CGAAAAGGATGCCGCCCTCGCCCGCCGGTTCCAACCGGTCACGGTCAACGAACCGAGCGTGGAAGAATCTATCAAGATTC TCGAAGGTATTCAGAAGAAGTACGAAGACTATCATCACGTTAAGTACGATCAAGATGCCATTGTGGCAGCCGTCAAGTTG TCAAATCGTTACATTCAAGATCGTTTCTTACCTGATAAGGCCATCGATTTACTCGATGAAGCTGGTTCACGTAAGAACTT GACGTTGAAGACGGTCGATCCAAAGACGATTCAAGAAAAGATCGACGAGGCAGAAAAGCAGAAACAGGACGCCTTGAAGA AGGAAGACTACGAAAAAGCCGCCTACTATCGCGATCAAGTTGCTAAGTTAGAAAAAGCTAAGCCCGATGAAAGTTCAGAC CAGCCTAATAACGATACTGCCACTGTAACAGTCAAGGACATGGAACAAATTGTCGAAGAAAAGACAAGTATTCCAGTTGG TGACTTGCAGGCTAAGGAACAGGCTCAAATGAAGACCTTAGCACCCGACCTTAAGAGTACGGTTATTGGTCAAGACCAAG CGGTTGAAGCAGTTGCCCGGGCCATCCGGCGTAATCGAATCGGTCTGAACGGAACTGGCCGGCCAATTGGTTCCTTCATG TTTGTCGGCCCAACCGGGGTTGGTAAAACTGAATTGGCTAAACAACTTGCTAAGGAACTGTTTGGTTCTCAAGATGCCAT GATTCGGTTTGACATGAGTGAATACATGGAACCACATTCAGTGGCTAAGTTGATCGGTTCACCGCCTGGCTATGTCGGCT ACGAAGAAGCCGGTCAGTTAACTGAACAGGTTCGTCGTCATCCATATAGCCTAGTCTTACTAGACGAAGTTGAAAAGGCT CATCCGGATGTCATGCACATGTTCTTGCAAATCCTCGATGATGGCCGGCTGACCGACTCACAAGGTCGGACTGTCAGCTT CAAGGATACGATCATCATCATGACTTCCAACGCTGGGACTGGCGACAGTGAAGCTAATGTCGGTTTTGGTGCCGCTGCTG AAGGCAAGACGCACGATATCACTAGCCGGTTGACGGACTACTTCAAGCCAGAATTCTTAAACCGGTTCGATGACATCATT CAATTCAACGCTTTATCTAAGGAAAACTTGATGAAGATCGTTGGTTTGATGATCGAAGACGTCAACGGTATGTTAGCTAA CCAAGGCTTACACGTCCACGTCACAGAACCTGTCGAGGAAAAACTCGTTGAACTAGGTTACAACCCTCAGATGGGGGCTC GCCCACTCCGGCGTGTTATTCAGGAACAAATCGAAGATCGCATCGCCGATTTCTATTTGGACCACGGCGACGTTAAGAAC ATGGTTGCAAAAGTTGAAGACGGCAAGATTGTTTTGGCGGCTGAGACGAAGTCCGAATAA Protein sequence : MLCDNCHKNEATIHLYTSVNGQRRQINLCQNCYQLLKNQEQQPNNGVGGADMAQDPFGFGGLDDIFRAMQGGVDPNNAYR QQQTPPTQPAGPNGGNRRGNNNGGGLLGQYGFNLTAQAKQGKIDPVIGRDTEINRVIEILNRRTKNNPVLIGEAGVGKTA VVEGLAQKIVSGQVPQKLLDKEIIRLDVASLVQGTGIRGQFEQRMQQLMKEVQSNPNIILFIDEIHEIMGAGNAEGGMDA GNVLKPALARGDFQLVGATTLNEYRDIEKDAALARRFQPVTVNEPSVEESIKILEGIQKKYEDYHHVKYDQDAIVAAVKL SNRYIQDRFLPDKAIDLLDEAGSRKNLTLKTVDPKTIQEKIDEAEKQKQDALKKEDYEKAAYYRDQVAKLEKAKPDESSD QPNNDTATVTVKDMEQIVEEKTSIPVGDLQAKEQAQMKTLAPDLKSTVIGQDQAVEAVARAIRRNRIGLNGTGRPIGSFM FVGPTGVGKTELAKQLAKELFGSQDAMIRFDMSEYMEPHSVAKLIGSPPGYVGYEEAGQLTEQVRRHPYSLVLLDEVEKA HPDVMHMFLQILDDGRLTDSQGRTVSFKDTIIIMTSNAGTGDSEANVGFGAAAEGKTHDITSRLTDYFKPEFLNRFDDII QFNALSKENLMKIVGLMIEDVNGMLANQGLHVHVTEPVEEKLVELGYNPQMGARPLRRVIQEQIEDRIADFYLDHGDVKN MVAKVEDGKIVLAAETKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 4e-151 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_003924344.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 0.0 | 59 |
| clpE | YP_003924344.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 6e-156 | 51 |
